Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0124 |
Symbol | |
ID | 3967578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 156003 |
End bp | 156662 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637919183 |
Product | short chain dehydrogenase family protein |
Protein accession | YP_525600 |
Protein GI | 90019773 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.635136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTTG TAATTACTGG TGCAAACCGC GGCATAGGCT TGGCCCTTGT ACAGGGCTAT TTGGCTAAAG GTGCCAAAGT ATTTGCGGTG TGCCGCGAAG CAACCCCAGA GCTTACGGCT ACTGGCGCAG AGGTAATAGA AGGGGTAGAT GTTACCGCAG CGGTATCTGT TGCTGCGCTG GCTGAGCGTT TAGATGGGGT GACCATTGAT GTGCTTATTA ATAACGCCGG CTTGTTCCAA AACGAGACCT TAGGCGCTAT CGATTACGAT CAAATAATTA CCCAGTTTCA TGTTAATGCC CTTGGGGCTT TGCGTGTTTC GGAAGCGTTA ATTAGCAATA TGGCGCGCGG CAGTAAAATT GGCTTAATTA CCAGCCGCAT GGGGTCTATT GCCGATAATA CCTCTGGCTC TTACTACGGC TATCGCATGT CTAAAGCGGC ATTAAATGCG GCGGGTATGT CGTTGGCGCA AGACTTACGC GGTCGCCAAG TGGCGGTGGC TATATTGCAC CCCGGCTTTG TGCAAACCCG CATGGTGGGT TTTGCCGGCG ATGTGGCCCC CGATACAGCG GCGGCGGGCT TAATCAAACG CATCGATAAC CTTACCCTCG AAACCAGCGG TTCCTTCTGG CACGCCAATG GCGAGCAATT GCCTTGGTAA
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Protein sequence | MNVVITGANR GIGLALVQGY LAKGAKVFAV CREATPELTA TGAEVIEGVD VTAAVSVAAL AERLDGVTID VLINNAGLFQ NETLGAIDYD QIITQFHVNA LGALRVSEAL ISNMARGSKI GLITSRMGSI ADNTSGSYYG YRMSKAALNA AGMSLAQDLR GRQVAVAILH PGFVQTRMVG FAGDVAPDTA AAGLIKRIDN LTLETSGSFW HANGEQLPW
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