Gene Sde_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0124 
Symbol 
ID3967578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp156003 
End bp156662 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content52% 
IMG OID637919183 
Productshort chain dehydrogenase family protein 
Protein accessionYP_525600 
Protein GI90019773 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.635136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTG TAATTACTGG TGCAAACCGC GGCATAGGCT TGGCCCTTGT ACAGGGCTAT 
TTGGCTAAAG GTGCCAAAGT ATTTGCGGTG TGCCGCGAAG CAACCCCAGA GCTTACGGCT
ACTGGCGCAG AGGTAATAGA AGGGGTAGAT GTTACCGCAG CGGTATCTGT TGCTGCGCTG
GCTGAGCGTT TAGATGGGGT GACCATTGAT GTGCTTATTA ATAACGCCGG CTTGTTCCAA
AACGAGACCT TAGGCGCTAT CGATTACGAT CAAATAATTA CCCAGTTTCA TGTTAATGCC
CTTGGGGCTT TGCGTGTTTC GGAAGCGTTA ATTAGCAATA TGGCGCGCGG CAGTAAAATT
GGCTTAATTA CCAGCCGCAT GGGGTCTATT GCCGATAATA CCTCTGGCTC TTACTACGGC
TATCGCATGT CTAAAGCGGC ATTAAATGCG GCGGGTATGT CGTTGGCGCA AGACTTACGC
GGTCGCCAAG TGGCGGTGGC TATATTGCAC CCCGGCTTTG TGCAAACCCG CATGGTGGGT
TTTGCCGGCG ATGTGGCCCC CGATACAGCG GCGGCGGGCT TAATCAAACG CATCGATAAC
CTTACCCTCG AAACCAGCGG TTCCTTCTGG CACGCCAATG GCGAGCAATT GCCTTGGTAA
 
Protein sequence
MNVVITGANR GIGLALVQGY LAKGAKVFAV CREATPELTA TGAEVIEGVD VTAAVSVAAL 
AERLDGVTID VLINNAGLFQ NETLGAIDYD QIITQFHVNA LGALRVSEAL ISNMARGSKI
GLITSRMGSI ADNTSGSYYG YRMSKAALNA AGMSLAQDLR GRQVAVAILH PGFVQTRMVG
FAGDVAPDTA AAGLIKRIDN LTLETSGSFW HANGEQLPW