| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0112 |
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| Symbol | |
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| ID | 3966012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 139836 |
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| End bp | 142910 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919171 |
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| Product | hypothetical protein |
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| Protein accession | YP_525588 |
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| Protein GI | 90019761 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0292658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CACCTAGCCG TTACAGTACG CTGGCCATAA CCCTGTGTAT GAGTTTATCG
CAGGCCGCTA TAGCAAAGGA TATCTACGTC GCCCCTACAG GAGATGACGC TGGAGCCGGA
TCGTTTAGCA GCCCCTATCA AACGCTGGCG AAAGCGGCAC AAACCGCACA AGCTGGTGAT
GTCGTTTACC TGCGCGAAGG CACCTATCAG GAAACGCTTC GCCCAGCGAA TTCAGGCACA
GCCAGTCACC CCATTGTGTT TCAATCCTAT CAGAATGAAA AAGTGATCAT CAGTGCAATG
GAAGCCTTAA GCGGCTGGCA GCAAGACACC TCAAATATTT ATAAAACCAC GGTGAACTGG
GATCTAGGCC AAGAAAATTT TGTGATGCAT AAATCTACAG CACTGGATTT AGCCCGCTGG
CCAAACAATA CCGATGCAGA CCCCTTCACG TTAAATTCTA AAAGAAACAC AGGGGGAAGT
GGCCCCGAGG TAGGCCAAGG TGCTTATATA GAATACGCAG CAGGATTGCC CAATATTAAT
TGGACTGGGG GTACCGTATT TTATTATGGC GATAAACCCG GTGGCGGTTG GCTAGCGTGG
CGCGAGACGA TTGTAAGCCA CACTCAAACC CGTATAAATA TAGACCTTTC TAAAAAGAAT
CCCGCGTGGG TACGCACCGC ACACGACCCG GCAAGCGGCG GAGAATTCTA TTTAATGGGC
GTAAAAGGTG CTTTAGATTA TCAGAACGAA TGGTACTTCG ATTCAAATAC GCGAGAGCTT
TTTGTCCAAC TGCCCAACGG CGCGCGCCCA CAAAATGGCG ATATTCAATT TAGAAAACGC
CTGCAGACCA TTAACTTGGC AAATAGAAGC CACATACACA TTAAAAACAT TGCTGTTTTT
GGTGGCGCTA TAGAAATAAC CAATAACGCT AATTCTAACC TGCTTTCTGG GGTATCCAGT
TTTTATGGCA ATGCTACGCT CGGTGTACAC ACCGGATTTT CGGCGCCAAG CTACAGCGTA
AAAATTCAAG GCAGCGATAA CCGTATAGAA AACAGTGAAA TTGCCTACGG CTCCGGTACT
GGGATATACG ACAGCGGCAC CCGCAGCCAA ATTGTGAATA ACTACATTCA CGATTTTAAT
ACCCTTGGCG ACTACAACGC GCCGGTTAAC GCGCGCGGCG GAAGTAATAC GTTAGTAAAA
AATAATCGAA TCTCCCGCGG AGGCCGCGAC ACCATACAAG CTTTTAATCG AGACAGCGAA
TGGTCGTATA ACGATGTTTC CCACAGTAAT TTAATAGCCG ATGACTGCGG CTTGTTTTAC
ACCGTTGGCG GACCACACAA TGTGGAAATC CATCACAACT GGTTTCACGA CGCATATTCA
CACGGCAACA AAAACAAAGC CGCTGGTATT TATTTAGATA ACGATGCCCG AGGTTTTAAA
GTACACCACA ACGTGGTGTG GAACACCGAG TGGACAGGCA TTCAAATAAA TTGGAACGGC
ACGGACATAG ACGTATTTAA CAACACATTA TGGAACAACA GTGCCGCTAT GGGAGCATGG
CACAAAGCCG GGACTGCGTT TTCGGATGTT CGAGTTTGGA ACAACCTCTC CAACAGTAAT
AAGTGGGAGG AGCAAGCCAA TAAGCAAAAC AACCTTACGG GAACAGGCGA TCCGTTTGTG
AACAGCCAAG CCGGAGATTT TAGATTAAAA GCCAATACGG CCCCTATCGA CTATGGCCGC
ACTATAGCGG GTACAACCGA GGGGCACAGT GGCGCCAACC CAGATGCTGG TGCGTATGAA
TACGGCGCAA CCGCTTGGAA AGCAGGCGTC ACATGGGATA TAACCAAAGG CGCAGCCAAC
CGCTGCTATC AACTTCCCGG TGAGGTTTGC TTTGATGACA CCGATACCGG CGGAGACATT
GGTGAGCTAC CCGGTAAAGT AGAAGCCGAA AACTACGCCC ACTACTACGA CACCACCCCC
GGTAATATTG GCGGCGCCTA CCGCAACCAA GATGTAGATA TTCAGCCCAC CACCGATACA
CTAGGTGGCT ACAACGTAGG CTGGATTAAC GCTGGCGAGT GGTTAGAATA CGACATCGAT
GTCACTCAGG CGGGGCGCTA TGATGCCGAG CTTAGAGTAG CCTCTAAACT GGGTGCGGGC
CAAGTAGCCA TAGCCATAGA TGGGGTCGCT AGAGGCGAAG CGTTAACGAT TCAGTCGACG
GGCGATTGGC AAAATTGGGC AACCCTAACA ACTCAACTAG GGTATTTAGA AGCAGGGCTA
CATACGCTGC GGGTATCCGC TATGAGCGGT GGCTTCAATC TAAATTGGTA TAACTTCACT
AAACAAGTAA GCTTTGGGGA AACCGCCGTA GGCTTCACCA ACACTCCTCC TACACGTATA
CCAGCTACAA GGCATCAGAG CTTTTCTGTG GATTATGTTG CCAACGAGCC GCGAGAACTG
TTCTTATTAT TTTTCAACCC CGACTGGAGT TGGGTAGCCT CGACAAAAAC AACCGTAGAG
CCCGGTAAAG CTTCTACCAC GTTGCAATTA AACCTTCCCT TTGTGCCAAC CGCTGTGCAA
GCATTTAACG TTAAATTAGA AAATCGCCCC ATAGGCGCCA ACTGGGATAA CCCGAACAAT
GTCGAAGCGC ACGCTGCCGT TACCACGCAA GCAGCACCGC TACAACATAA CGGTGGCTTC
GAAAACGGTG GCACCTCGGG TTGGAATGGA TACGGTAGCC ATGCACTTAG CACAGAAGCC
CACAGCGGCA GCTATGCAGG CAAAGTAACC GGTGGCCCCT CCGCGTTTTC GCAAACTATT
CCCAACCTTA CCCCAAACAC CACCTACAGC CTCTCGGCTT TTGTTAAAGC ACGCGCTGGT
CACACGGGGT TTTTAGGCGT TAAAGAATAT GGAGGCCAAG AAACGAGCCT GATAGTAAAC
AGCACCCACT ATCAAAAGAA AACCATCACC TTCACCACCG GCCCCAACGC CAGCTCGGCA
AAAATTTATT TATACGTTAG GGATAACAAC CATGTGGCGT TTATTGATGA GTTAGTCATT
GTGAAAGTGT ACTAG
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| Protein sequence | MKKPPSRYST LAITLCMSLS QAAIAKDIYV APTGDDAGAG SFSSPYQTLA KAAQTAQAGD
VVYLREGTYQ ETLRPANSGT ASHPIVFQSY QNEKVIISAM EALSGWQQDT SNIYKTTVNW
DLGQENFVMH KSTALDLARW PNNTDADPFT LNSKRNTGGS GPEVGQGAYI EYAAGLPNIN
WTGGTVFYYG DKPGGGWLAW RETIVSHTQT RINIDLSKKN PAWVRTAHDP ASGGEFYLMG
VKGALDYQNE WYFDSNTREL FVQLPNGARP QNGDIQFRKR LQTINLANRS HIHIKNIAVF
GGAIEITNNA NSNLLSGVSS FYGNATLGVH TGFSAPSYSV KIQGSDNRIE NSEIAYGSGT
GIYDSGTRSQ IVNNYIHDFN TLGDYNAPVN ARGGSNTLVK NNRISRGGRD TIQAFNRDSE
WSYNDVSHSN LIADDCGLFY TVGGPHNVEI HHNWFHDAYS HGNKNKAAGI YLDNDARGFK
VHHNVVWNTE WTGIQINWNG TDIDVFNNTL WNNSAAMGAW HKAGTAFSDV RVWNNLSNSN
KWEEQANKQN NLTGTGDPFV NSQAGDFRLK ANTAPIDYGR TIAGTTEGHS GANPDAGAYE
YGATAWKAGV TWDITKGAAN RCYQLPGEVC FDDTDTGGDI GELPGKVEAE NYAHYYDTTP
GNIGGAYRNQ DVDIQPTTDT LGGYNVGWIN AGEWLEYDID VTQAGRYDAE LRVASKLGAG
QVAIAIDGVA RGEALTIQST GDWQNWATLT TQLGYLEAGL HTLRVSAMSG GFNLNWYNFT
KQVSFGETAV GFTNTPPTRI PATRHQSFSV DYVANEPREL FLLFFNPDWS WVASTKTTVE
PGKASTTLQL NLPFVPTAVQ AFNVKLENRP IGANWDNPNN VEAHAAVTTQ AAPLQHNGGF
ENGGTSGWNG YGSHALSTEA HSGSYAGKVT GGPSAFSQTI PNLTPNTTYS LSAFVKARAG
HTGFLGVKEY GGQETSLIVN STHYQKKTIT FTTGPNASSA KIYLYVRDNN HVAFIDELVI
VKVY
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