| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0101 |
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| Symbol | |
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| ID | 3966001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 125617 |
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| End bp | 126057 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637919160 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_525577 |
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| Protein GI | 90019750 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.464439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATATTA CTCGCTTTAC CGACTATTCC TTGCGCGTAT TAATGTACGC CGGTTTGCGC
GATGGCGAGT TGTGCACCAT TCAAGAAATA GCTGATAGTT ACAATATATC TAAAAACCAC
CTTATGAAGG TGGTACAAGA GCTAAATATA AAAGGCTATT TAAAAGCAAT ACGCGGTAAA
AATGGCGGCC TTACCCTTGG TCGCCCTGCC AATGAAATTA ATTTAGGCAG CTTAGTACGC
GACACAGAGC AAGATTTTAA TATTGTGGAA TGCTTTAGCG AAGCGGATAC CTGCACCATT
ACCCCAAACT GCAAATTAAA ATCTATATTG GCCCAAGCAT TAAATGCCTT TTTAGGCGTG
CTAGACGACT ACACATTAGA AGATTTACTT GCCCCGCGCA CTAAAGCGCC GTTAATGAAA
CTTCTGTTTA CCGATAAATA G
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| Protein sequence | MHITRFTDYS LRVLMYAGLR DGELCTIQEI ADSYNISKNH LMKVVQELNI KGYLKAIRGK
NGGLTLGRPA NEINLGSLVR DTEQDFNIVE CFSEADTCTI TPNCKLKSIL AQALNAFLGV
LDDYTLEDLL APRTKAPLMK LLFTDK
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