Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0099 |
Symbol | |
ID | 3965999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 122243 |
End bp | 123493 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919158 |
Product | hypothetical protein |
Protein accession | YP_525575 |
Protein GI | 90019748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATGCG TATTAGATTC AACATTAGAG CGAACCGACG AAGAGGGATT TTTAACACGG CCGCGCTGGC TGGATGAGGA GCGATTACCC AATCGCGTGC TCGACCGCTT TTTAACTAAA TTAGAAAGCG GTCAGCGTCT GTCCATGCGA GTTAACAGTA AAACCACCCC CGAGCTATTC GATTTTCAAG ACGAAGATGT GCGCTACCAG TGGGAGTTGT TAAAAAGTCT CGACAAAGAA TTTCATATTC TTAATATCAA GCTAGAGCGC AACAAAGCGC ACCAAGAAAG CTACGAAAAT GCCCGCCTGT ATTTTAACCC CGATAAAGAA CCGCTCGTTC GCCATTGGCT AAACCGCCCA GCTATAGACC CCTACGCGCT AGTGTGGGAA GCCGAGCTCG CGAAACAAAA ACACCATTTT GACGATTACG GCCAAGCACT GTTCGAGCGC ATAGTACGCC TGCCCGATCG CGGCCCAGAG CAAACCATTA AAGCCTTTGC CCGCATAGGC AAAGAGCTGC AAAAGCCCAT TACATTGCGT GCGCTATCTG CCCGCTGCTT TTGGGGCGAT TCTAAATTTT TAGAGCACAA CGAACAATTG GTGCGCGATT TATTTCCAAG CGTAGAGCAC AACATTTTAC CGCGCCCAAT ACTTATGTGC GTTCACTTGC CCGAGCAGCT AGAGCATGTG TTGTTTGTAG AAAACCAAGA TACATTTTTG GCTCTGGCCG CCGCCAACCT ACCTAACTAC GCACTGGTAT ATAGCGCCGG TTTTCGCGGC AGCGCGCTAA GAATTCGCAC ACCGGGCAAC GCAGTGTTTA GCTTTATAAA CCACAGCAAT AATGCAATTA AAGATGCGTT TGAAGCATGG TGGTTTGAAG CTAATACCAA GCATGCCAGT AACAAAGATT CCAGTAACAA AGTAAGCACA ATAAACCCCA TTAAAACGTG GTTGTGGGGC GATTTAGATT TTGCCGGCTT CACCATTTTA AAAGCACTGC GCCAAACATT TAGCACTATA AAAGCGTGGC AACCGGGTTA CCTACCCATG TTAAATAAAT TAGAAACCGG TTGGGGCCAT GGCCACGAAG AAAGCGGCAA AGGCCTACAA AAAGACCCAG AGCAAACCGG CTGCGAATTT ACCGATACCG TACTATTACC TGCAATGCGC GAAGAGGGCG GCTTTGTGGA CCAAGAAGTG GTGTCGCTAG AAGAGCTAAT GGCGGTGTTA GAGCACGGTG GCAGCGAATA A
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Protein sequence | MGCVLDSTLE RTDEEGFLTR PRWLDEERLP NRVLDRFLTK LESGQRLSMR VNSKTTPELF DFQDEDVRYQ WELLKSLDKE FHILNIKLER NKAHQESYEN ARLYFNPDKE PLVRHWLNRP AIDPYALVWE AELAKQKHHF DDYGQALFER IVRLPDRGPE QTIKAFARIG KELQKPITLR ALSARCFWGD SKFLEHNEQL VRDLFPSVEH NILPRPILMC VHLPEQLEHV LFVENQDTFL ALAAANLPNY ALVYSAGFRG SALRIRTPGN AVFSFINHSN NAIKDAFEAW WFEANTKHAS NKDSSNKVST INPIKTWLWG DLDFAGFTIL KALRQTFSTI KAWQPGYLPM LNKLETGWGH GHEESGKGLQ KDPEQTGCEF TDTVLLPAMR EEGGFVDQEV VSLEELMAVL EHGGSE
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