| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0097 |
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| Symbol | |
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| ID | 3967336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 117170 |
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| End bp | 118528 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919156 |
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| Product | hypothetical protein |
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| Protein accession | YP_525573 |
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| Protein GI | 90019746 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATA CTTTTTTAGA AGAGCAGTTA AAACCTGCGG GCTTAAGCCG AGAAGAATTT
TCTGAGGTGG TAATTCGCCT TTTGGATTAC GGCGTAATAT GCCGTGACGA AAGCCAAATA
GAAGCATCGC TGTACGATCG CTATTTGCAG TGCGCCAACA CCGTAGAAGA TTACTTAGCC
GTAATTGGTG TGCGCATACA GCACGATCGT CAATTTTGCT TTTTGCGCGT ATTTCCACCC
GGTGCCAATG TGCCCGGTAT GGCAGACGAA GACTGCTCGC CATTTAACAG TGGCTTTCGC
GCTAAACCCA ATCAGCAAGA GGTGGCAGCT ATTTTAGTGT TGCGCGCAGA ATACGAAAAA
TCGCTGCGCG AAGGGCAGGT AGATGAAAAA GGGCGGGCCA TGTTATCGCT AGAAGGCCTA
GCAATAGCTA TGAACAACCT GCTTAAACGC GCCTTGCCCG ATGGCCTCGT CGAGCGCAAA
AACTTGTTTC GCCGATTGCG TCAATTGCGC TTGGTGCACT TTAATACCGA AGATGAGCTG
GATAACAGCG AAAGCTGGTT AAGCATTCAG CCCTCTATTA CAAGCTTTGT AAGCGATGAG
GTTTTATCTA CCCTGTTAGA CCAAAGCGAT GCTTCTGTAC CGGTTAACAA GCCAGCTATA
AACGAAGCGG GCAAAAGCGA AGCCAACGCA ATTGAAGATG AAGCCGATAA AGAAATAGAA
GAAGAAAATA AAATTATTCC AAGCGCGCTT TTTGGCAGCA GCGATGCAGA TAGCAGCGCA
GGCGCTGATG AAGTGGAAGA AGGTGCTACC CAAAAAGAAC CAGAGCAAGT AGACGAGCAA
CAAGCGCCGC CAGTTGTGGA AGCAAGAGCT ACAAATGTAG AAGCTACAAA GGCAGAAGCA
GTTAATAAAA AAACTGCAGA AGAAAAAGCA GCTGAAGCAA CAACAAGCAA GCAAAAAGCC
CCAGCTAAAA AAACAGCAAC TAAACCCGCT GCCAAAAAAG CCGTAGCAGC TAAAACACCA
GCAAAACCTG CAGCCAAGGC GGCGCCCGCT AAAAAGGCTG CACCTGCTAA AAAAGCAATG
GTTGCCAAAC CCGCGGCTAA GCCTGCCAGC AAACAGCCAG CTACAACTAA AAAACCAGCA
GCTAAAAAGC CTACGGCAAA ACCAGCACCC GCAAAAAAAG CCACAACGGC TAAAGCTGCG
GTAAAAAAAG CGCCTGCTAA ACCGGCCGCA ACTAAAGCAA CAGCCACTAA AACCCCCGTC
GCTAAAAAAC CAGCAAAAAA AGCACCTGCA AAAACAGCAG CAGCTAAAAA ATCACCGGCT
CGCAAAGCCC CAGCAAAACC TAAAGGGGGT AAAGCCTAA
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| Protein sequence | MIDTFLEEQL KPAGLSREEF SEVVIRLLDY GVICRDESQI EASLYDRYLQ CANTVEDYLA
VIGVRIQHDR QFCFLRVFPP GANVPGMADE DCSPFNSGFR AKPNQQEVAA ILVLRAEYEK
SLREGQVDEK GRAMLSLEGL AIAMNNLLKR ALPDGLVERK NLFRRLRQLR LVHFNTEDEL
DNSESWLSIQ PSITSFVSDE VLSTLLDQSD ASVPVNKPAI NEAGKSEANA IEDEADKEIE
EENKIIPSAL FGSSDADSSA GADEVEEGAT QKEPEQVDEQ QAPPVVEARA TNVEATKAEA
VNKKTAEEKA AEATTSKQKA PAKKTATKPA AKKAVAAKTP AKPAAKAAPA KKAAPAKKAM
VAKPAAKPAS KQPATTKKPA AKKPTAKPAP AKKATTAKAA VKKAPAKPAA TKATATKTPV
AKKPAKKAPA KTAAAKKSPA RKAPAKPKGG KA
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