Gene Sde_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0096 
Symbol 
ID3967335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp115723 
End bp117177 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content50% 
IMG OID637919155 
Productferrochelatase 
Protein accessionYP_525572 
Protein GI90019745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTG AAGCCCACCG CTATCAGTTC TTTAGGCCCC TTGTAGGCAA GTACCGCGAA 
CAGGTGGTGG AATGCCTGCG TCTGCTGTAC CAGCGCTTGT ACAGCTCTAA TGCCGATTAC
GGTCACTCGC TTTCGCGCGA GCAAGTAATA GAAATACTGG AAGAAGCACT GGTGCGCGCA
CCGGTAATGG AGTTGGCAGA GGGTGAAGAG GGCGCAGCGG ACGAGCTTGC CCCGCAACGC
TTTAAAAGTA ACCGCGAACA CGCCAGCTGG ATACTCAAGC AACTGCTGGA TTACGGCTGG
CTAGAGAAGC AGGTGGATAC CGCTACGCTG CAGTCGACTT ACCCCTTCTC GCGTATGGGG
CGATTATTTA CCCAGCCGCT CGTTGAGGCC GACAGCAACC AAATTCGCAC CCGCCATCGC
AACACCCGCA ATACGCTCAA TGCATTAGAA GCGTTTCTAA ACCGTGGCGA AGTGCACGAC
CTTTTAGATG CGTTTGAATA TTCAGAGCGC ATTGTTACCG ACTTTACCGA TGTGATTGCC
GAGCTAGAAG ACCGCAAGCG CCAGCTAGTG CGCGAAGTAG AATCGCAACA ACTAGTGCAA
CAGGCAACAG ACCAATTTTT TGAATTTATG GAGAAGCGTT TTCAGCCCGA TGTGTCGGTT
CGCCTTTCGG CTGATAGCGT AGAAAAACAC CGCGACCAAA TAAATAAGGC CGTGACAAAA
ATTCGCAGAA AAAACAAAGA ATTTAATCGC GAAGTAGAAA TTCAGTTGCG CCGGTTAATT
CCGGAAATGG CATTGCCGGG CCAGTCGGTG TTGTGGACTA TTTTAGATAC CATCGAGCGC
CGCATGGCCA ACGCTTCCGA AATTATGCTG CCCGCATTGC GCCGCGCGCT GCATAGTTTT
ACCAAGCGCG CCGATATTAT TATTCGTCAA CTAAGTTATT TAACCAGCCA AAGCAATAAC
GATTTATTGC GCGTGTGCAA AGCGGTAAGT GAGCTAAGCC AAGAAGAGGC CGACGAGCGC
TTAAACGCTG CGGCCGAGCA TATGGCCAAT ATGAAACTGC AGCTAATCGA CCCTGCGCAA
ATTAAATTGC TAGAGCGCAA GCAAACGCGC ATGGTGCAAA CCGCCGTTAT GGAGCAACAA
CCGCTAGATG CCGAAGCTCA GCGCGATTTA AATATTCAGC AGTTGTTAGA TCAAGCGTTT
GCAATGGATA ACAAAAGCCT GCGCGGTTAT GTGTTTAAGG CATTGCGCGA AGGCCGCAAA
ATTACCAGCA AAAATTTACC TGTAGATAGC GCAAAAGATT TGCTAGCCAT GGCCCACGTA
ATTGAAGTGG GTGGCGTAAA CGGCTTAAGC AGCGACTACC AATTTATAGT AGAGCCAACC
GGTAACCGCA TTGAGTCGGA TTATTACCAC GCGCTAGACG AGTTTACCAT CGAGTTAAAA
ACCAAAGATG ATTGA
 
Protein sequence
MFFEAHRYQF FRPLVGKYRE QVVECLRLLY QRLYSSNADY GHSLSREQVI EILEEALVRA 
PVMELAEGEE GAADELAPQR FKSNREHASW ILKQLLDYGW LEKQVDTATL QSTYPFSRMG
RLFTQPLVEA DSNQIRTRHR NTRNTLNALE AFLNRGEVHD LLDAFEYSER IVTDFTDVIA
ELEDRKRQLV REVESQQLVQ QATDQFFEFM EKRFQPDVSV RLSADSVEKH RDQINKAVTK
IRRKNKEFNR EVEIQLRRLI PEMALPGQSV LWTILDTIER RMANASEIML PALRRALHSF
TKRADIIIRQ LSYLTSQSNN DLLRVCKAVS ELSQEEADER LNAAAEHMAN MKLQLIDPAQ
IKLLERKQTR MVQTAVMEQQ PLDAEAQRDL NIQQLLDQAF AMDNKSLRGY VFKALREGRK
ITSKNLPVDS AKDLLAMAHV IEVGGVNGLS SDYQFIVEPT GNRIESDYYH ALDEFTIELK
TKDD