Gene Sde_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0089 
Symbol 
ID3967328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp111021 
End bp111425 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content41% 
IMG OID637919148 
Productvault protein inter-alpha-trypsin 
Protein accessionYP_525565 
Protein GI90019738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGT TGATTGCCGC TGTTACTATT TGTTTTGCTC TGTTTTTACT GTGGATTATT 
TACCTCGCCA ATACAGGCCA ACCGAGCATA TTTTTTGATT TTGTAAGGCG CATACCCAAT
GGCGATAAGT TAGGGCATGT GTTGCTATTT GGTTGTTTAA CCTTGGGCGC TATTATTACT
ACAAGCTTTA GGTGTTTTGG TTTGTTGAGC GGCAGGCTAA AAGTGTATTG GGGTACAGCG
GGGGTGTTGG TATTTGTGTT AGTGGAAGAG TTTACGCAGC AGTTTTTCCC GAGTCGTACA
ATGGATATAA ATGATTTAAT CGCAGATGCA ATTGGTATTT CTCTATTTAC GTTGTTGGCG
TTTGTAATGA ATACTTTGCG CAAACGCCAA CAGGTAAACA GCTAA
 
Protein sequence
MQKLIAAVTI CFALFLLWII YLANTGQPSI FFDFVRRIPN GDKLGHVLLF GCLTLGAIIT 
TSFRCFGLLS GRLKVYWGTA GVLVFVLVEE FTQQFFPSRT MDINDLIADA IGISLFTLLA
FVMNTLRKRQ QVNS