Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0088 |
Symbol | |
ID | 3967327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 110214 |
End bp | 110867 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919147 |
Product | hypothetical protein |
Protein accession | YP_525564 |
Protein GI | 90019737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAC CCAACCCTAT TGCCACGCTT TACTACAAAA AATACCGCAA TCCATTTCGG TTGGGCTCGT ACGTGGGGTT TATTCGCGGT TTTTGCGCCA AGCCTATTGC GCCCTACTTA ATTGGCGAAT CGCAATTAAA TGCAGATACA CTGCAACGTT TAAGCCGCTC GCGCGACGCC GTGCGCACTA TGGTTATAGA AGGGTTAGAT AGCGATGCGG CAAATAAATG GTTCCAAACC ATGGCACTTG GGCATAAACA CGTAGCCCTA GACGATACAC ACTACCTATA TGTACTCGCC AATTTTTACT TAGAACCTTT GCGCGTACTG CGCCAACAAC ATAAAAACTT AACCAAGCAA GAGCACGCAC ACTATTTAGC ATTTTGGAAT AAAGTAGCCA CCAAAATGCA ACTAACCAAT ATACCCACCA CCTACCTACA GTGGCTAACC CTGCGTAACA ACTACGAACG CGAACACGCT GGCGCATCGG CAGAATCTAA ACTGCTTATG CAACGCTGCT TATATTTAGT AGTGAATTTT TCTATTCCGT TTGGCTTTAG GGGAATATCA CGCAGAATAA TCGTAAACCT ACTACCGCAA AAACATCGCG ATTGGTTTGG CTTGGCAGCG TGTAGGTGGT TGCGAGTTTG TTAG
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Protein sequence | MTSPNPIATL YYKKYRNPFR LGSYVGFIRG FCAKPIAPYL IGESQLNADT LQRLSRSRDA VRTMVIEGLD SDAANKWFQT MALGHKHVAL DDTHYLYVLA NFYLEPLRVL RQQHKNLTKQ EHAHYLAFWN KVATKMQLTN IPTTYLQWLT LRNNYEREHA GASAESKLLM QRCLYLVVNF SIPFGFRGIS RRIIVNLLPQ KHRDWFGLAA CRWLRVC
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