| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0077 |
|---|
| Symbol | |
|---|
| ID | 3967161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 98054 |
|---|
| End bp | 98935 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637919136 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525553 |
|---|
| Protein GI | 90019726 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.453985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGTC TTGCCCTTAT ATTGGGATTA ACGTTGGCAC TTGCCGCTTG TGGTGAGAGT
GCTAAAACCA GTGATGCAGC CAAAGAGCAG GCGCCATCTA AACCAAGTGA AGCGGCGCAG
GTTGCTGAAC AAACTAGCGA AGCCGCGCAA ACGGCTAAGC AAGAAGTAAA AGCAACGGCT
AAAGAAATAA AAGATGATGT TACAGCCGCT GCAGATATGG CTGCCGAAAA AGCACAAGCT
GCAGTAGAAG AAACCAAAGA AGTAGCGAAA GACGTTAAAA AGCAAGTTGA GTCGCAGGCG
TTACCCGCTA CTATGTTCCA AGAAGGCACG CATTACGAAG TACTCAAGCA GCCAGTACGC
ACAATTACCC CAGGTAAAAT TGAAGTAACA GAAGTGTTTG CATACAGCTG TGGCCACTGC
TTTAACTTCG AGCCTATTGT AAATGCTTGG AAGAAAACCC TACCCGACTA TGTTCAGTTG
GTTAAGTCGC CAGCCATATG GAATGCCAGC ATGGAGCCCC ATGCGCGCAT GCACTTCGCA
GCCATTGCGT TAAGCGTACA AGACACAATT AGTGCAGCGG CATTTAATGC TATTCACCGC
GAGCGCAAAC CATTAAGTTC TCAGGCAGAT ATTGCCAAGT TGTTTGTTGC CGCCGGTGTA
GATGAAGCCA AATTCAACGA AACCTATAAT TCGTTTACCG TAAGTAGCCA AGTGAATCAG
GCTAATGCAC GCGCTCGTAG CATGATGATA TCTGCAACCC CAGAAATTGT GGTAGACGGC
CGCTTCCGTA TTTCTACCCG TTTTAGCGGT GTAGAGTCTC AGTCCGACAT GTTAAAAGTT
GCTAATTTCC TTACCAACCA AATTCACCAC GGTAAGCTGT AA
|
|---|
| Protein sequence | MQRLALILGL TLALAACGES AKTSDAAKEQ APSKPSEAAQ VAEQTSEAAQ TAKQEVKATA
KEIKDDVTAA ADMAAEKAQA AVEETKEVAK DVKKQVESQA LPATMFQEGT HYEVLKQPVR
TITPGKIEVT EVFAYSCGHC FNFEPIVNAW KKTLPDYVQL VKSPAIWNAS MEPHARMHFA
AIALSVQDTI SAAAFNAIHR ERKPLSSQAD IAKLFVAAGV DEAKFNETYN SFTVSSQVNQ
ANARARSMMI SATPEIVVDG RFRISTRFSG VESQSDMLKV ANFLTNQIHH GKL
|
|---|
| |