| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0075 |
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| Symbol | engB |
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| ID | 3967159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 96189 |
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| End bp | 96830 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919134 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_525551 |
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| Protein GI | 90019724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.611399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAAAA TCCACTTTCG CACTGCCCAA TTTTTAATCA GCGCCCCCAG TATTCGCCAA
TGCCCTACCG AAGAAGGTAC AGAAGTGGCC TTTGCAGGAC GCTCCAATGC GGGTAAATCC
AGCGCCATAA ACACCCTTAC CGGCAACGGT AAACTCGCCC GCACCAGTAA AACCCCCGGT
CGCACCCAGT TAATTAACTT TTTTAACTTC CCTGCGGCGC CCGATCAACG CATTGTAGAC
TTACCCGGCT ACGGCTACGC CAAAGTGCCA ATGGCTGTGA AGAAAAAATG GCAGGCCGAC
CTTTCGGAGT ATTTGCAGCA GCGCGATGCA CTGCGCGGCT TGGTAATAGT GATGGATATT
CGCCACCCTC TGCAGGACTT TGACACAATG ATGATCAACT GGGCAGTTGA AGGTGAAATG
CCCGTACACC TATTGCTTAC CAAAGCCGAT AAGCTAAAGC CTGGGGCCGC TAAAAGCACC
CTACTTGCGG TACAAAAACA TATGCGCGAT GCACAGGTAG ACGATTTGGT AAGCGCACAA
ATGTTCTCTG CACTTAAGAA GCAGGGCATA AATCAGTTAG AAGACGTATT AAACGGCTGG
CTGTTGCCGC AGCACGATGA GCCAGAAGCG GCGCAGGAAT AA
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| Protein sequence | MAKIHFRTAQ FLISAPSIRQ CPTEEGTEVA FAGRSNAGKS SAINTLTGNG KLARTSKTPG
RTQLINFFNF PAAPDQRIVD LPGYGYAKVP MAVKKKWQAD LSEYLQQRDA LRGLVIVMDI
RHPLQDFDTM MINWAVEGEM PVHLLLTKAD KLKPGAAKST LLAVQKHMRD AQVDDLVSAQ
MFSALKKQGI NQLEDVLNGW LLPQHDEPEA AQE
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