| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0066 |
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| Symbol | |
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| ID | 3967150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 82187 |
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| End bp | 82945 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919125 |
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| Product | putative ribonuclease HI |
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| Protein accession | YP_525542 |
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| Protein GI | 90019715 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0792726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAGTA AGTTTTACGT AGTATGGCAA GGTAGGCAAA CGGGTATTTT TACCGATTGG
GCAACGTGCA AAAAGCAAAT CGATAAATTC GCTGGCGCGC GTTATAAGTC GTTTCCTACT
AAAGCCGAAG CAGAGGCTGC TTTTGGTGGT AAAGGTGTAA CTGCGTCTAC CGGTGCGGGT
AAACGCGCTA CCGGCAACAA CACCGTAAAA ACCTACAGCG CCAAAGAAGT CGATGCACTG
GATGCCTACA CCAAAATTTT TACCGATGGC GGTTGTGAGC CAAACCCTGG TAATGCAGGG
TCTGGTATTG CGGTGTACCG CGACGGCAAA ATTAGTGAGT TGTGGTACGG TTTGTACAAT
CCCAACGGCA CCAATAATAC CGCCGAGCTA AACGCTTTGC ACCAAGCGAT GATGCTGGCC
GAGCAAGAGC TTGCAGCGGG CAATAGTACG GCGATTTTTT GCGATTCGAA GTATTCTATT
CAATGCATAA CCCAATGGGC AGCGGGCTGG CAGAAAAAGG GCTGGAAAAA AGCGGGCGGC
GAAATTAAAA ACCTTGAATT AATTCAAACC ATGTTCGCCC TTTACCAAAC CCTTAAGGGC
AAGGTGCAAA TACTGCATGT TAATGGCCAT GTGGGCGTAG AAGGCAATGA GCTTGCCGAT
CGTATGTCTA TTTTGGCTAT AGAAAGCCAA GAGACGGAGT TTGCCCGCTA TGGCGAGCCG
ATTGATATTG CTGGGTTGTT GGCTATGAGA AATGGGTAG
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| Protein sequence | MASKFYVVWQ GRQTGIFTDW ATCKKQIDKF AGARYKSFPT KAEAEAAFGG KGVTASTGAG
KRATGNNTVK TYSAKEVDAL DAYTKIFTDG GCEPNPGNAG SGIAVYRDGK ISELWYGLYN
PNGTNNTAEL NALHQAMMLA EQELAAGNST AIFCDSKYSI QCITQWAAGW QKKGWKKAGG
EIKNLELIQT MFALYQTLKG KVQILHVNGH VGVEGNELAD RMSILAIESQ ETEFARYGEP
IDIAGLLAMR NG
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