| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0060 |
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| Symbol | |
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| ID | 3967144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 72902 |
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| End bp | 73882 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919119 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_525536 |
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| Protein GI | 90019709 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.741905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTACC TACTAAAAAG CCTGTTAAAG CAGCACTCGT TTTTGTACCT AAGTATTACC
TTGCTGGCCT TTTGGGGGGG GAGTGCATGG GCGCAGTCCG ATGTAAAACG CCCTCAAATT
TTGGTGAGCA TTCAACCCAT TGCGCTGCTT GTGCGCGACC TAATTGGTGA CCAAGCCGAC
GTTCATACCC TGTTACCCGG TGGCTCTTCC CCTCATCACT TTCAATTAAA GGTGTCTGAT
CGCAAACGCC TATTAGAAGC CGATACCCTT ATTTGGGTGG GTGAAGATTT AGAGCGTTTT
TTAGAAAAAG TAGCGAATCA GCGCGCGACC AATCAGCAGG CGGTTATCGA ACTAGTCGCT
ATCGACGGGT TAGAGTGGCC GCAAATGGCA AGCGTTGAAG AGCCCAAACA AGGCCACGCT
TCCGATCATC AAGAGTATCA TCAAGAACAC GATCACAACG ACCATCACCA TGCCCACGGT
GTAGACCCCC ACTTATGGTT AAGCCCAACC AACGTGCAGC GCGTATGGCA CGCATTGGCC
CAGCAGCTTG GCGAGCAGTT TCCGCACTTA ATTACCACCA TAAACAACCG CTTGGCCAGC
CAAACCCAAG CTTTGCAGCA GGCCAGTAGC GCAACAGAAA CAGCATTCGC AGGTGTAACA
CAGGGCTATT ATGTGTACCA CGATGGCGTG GCCCACTTCG CCAAAGCAAA CAACCTAGAC
CAACTAGGGG CGCTTACCCA GGTGCCAGAC GAAGCCATAA GCGCAAAACA CCTGCGCGAA
CTCAACCATA ACGCCACCAA CGCCGCCTGC TTAATAGCCG ATTGGAGCGA AGTACAACAG
GCAAGCAAAT ACGGCAAGCG CTTGGGGCTT AGCGTTACCA CGGTAGACGT ATTAGCCACC
CAAACCGCCT ACGCCAGCTA TAACGATTAC TACACAAAAT TTGCCAAACA GTTCCAAGGT
TGTTTTATAC TGGCGCAATA A
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| Protein sequence | MNYLLKSLLK QHSFLYLSIT LLAFWGGSAW AQSDVKRPQI LVSIQPIALL VRDLIGDQAD
VHTLLPGGSS PHHFQLKVSD RKRLLEADTL IWVGEDLERF LEKVANQRAT NQQAVIELVA
IDGLEWPQMA SVEEPKQGHA SDHQEYHQEH DHNDHHHAHG VDPHLWLSPT NVQRVWHALA
QQLGEQFPHL ITTINNRLAS QTQALQQASS ATETAFAGVT QGYYVYHDGV AHFAKANNLD
QLGALTQVPD EAISAKHLRE LNHNATNAAC LIADWSEVQQ ASKYGKRLGL SVTTVDVLAT
QTAYASYNDY YTKFAKQFQG CFILAQ
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