Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0059 |
Symbol | |
ID | 3967143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 72305 |
End bp | 72793 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919118 |
Product | zinc uptake regulation protein, putative |
Protein accession | YP_525535 |
Protein GI | 90019708 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACCC TAAAAAACAC TCAAGACGAG CACGATCACA GCAAATGCGT CCATAAGGCG CTAGAGCAGG CCAAAGTACT GTGTGAAAAA CAGGGTGCGC GCCTAACAAG GCTGCGCAGA CAAATTTTGG AGCTGGTATG GCAAAGCCAT AAACCCCTCG GTGCCTATAC ATTAATGGAT ATGCTAGCAG ATAACTCCGA CCGCAAACGG GTGGCACCGC CTACGGTTTA TCGCTCGCTG GATTTTCTGT TAGAGCAGGG TTTAATCCAC AAGGTGCACT CGCTTAACGC GTATATGGGT TGCTCGCACC CAACTCAAAA AGACAGTGAA GCGCTGTTTA TTTGCGGCAC TTGTGGCCAC ACAGAAGAAA TTCGCAGCAA CAGTATTCAA CAGGCTATAA ACCTCGCCGC CTCCCAACAC CGGTTTACGG TAAACCAGCA AATATTGGAA GTAGTGGGCC TGTGTAACCA ATGTAAGGGC AAACGATAA
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Protein sequence | MFTLKNTQDE HDHSKCVHKA LEQAKVLCEK QGARLTRLRR QILELVWQSH KPLGAYTLMD MLADNSDRKR VAPPTVYRSL DFLLEQGLIH KVHSLNAYMG CSHPTQKDSE ALFICGTCGH TEEIRSNSIQ QAINLAASQH RFTVNQQILE VVGLCNQCKG KR
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