Gene Sde_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0059 
Symbol 
ID3967143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp72305 
End bp72793 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID637919118 
Productzinc uptake regulation protein, putative 
Protein accessionYP_525535 
Protein GI90019708 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCC TAAAAAACAC TCAAGACGAG CACGATCACA GCAAATGCGT CCATAAGGCG 
CTAGAGCAGG CCAAAGTACT GTGTGAAAAA CAGGGTGCGC GCCTAACAAG GCTGCGCAGA
CAAATTTTGG AGCTGGTATG GCAAAGCCAT AAACCCCTCG GTGCCTATAC ATTAATGGAT
ATGCTAGCAG ATAACTCCGA CCGCAAACGG GTGGCACCGC CTACGGTTTA TCGCTCGCTG
GATTTTCTGT TAGAGCAGGG TTTAATCCAC AAGGTGCACT CGCTTAACGC GTATATGGGT
TGCTCGCACC CAACTCAAAA AGACAGTGAA GCGCTGTTTA TTTGCGGCAC TTGTGGCCAC
ACAGAAGAAA TTCGCAGCAA CAGTATTCAA CAGGCTATAA ACCTCGCCGC CTCCCAACAC
CGGTTTACGG TAAACCAGCA AATATTGGAA GTAGTGGGCC TGTGTAACCA ATGTAAGGGC
AAACGATAA
 
Protein sequence
MFTLKNTQDE HDHSKCVHKA LEQAKVLCEK QGARLTRLRR QILELVWQSH KPLGAYTLMD 
MLADNSDRKR VAPPTVYRSL DFLLEQGLIH KVHSLNAYMG CSHPTQKDSE ALFICGTCGH
TEEIRSNSIQ QAINLAASQH RFTVNQQILE VVGLCNQCKG KR