| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0051 |
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| Symbol | |
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| ID | 3965359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 55438 |
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| End bp | 56280 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919110 |
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| Product | periplasmic nitrate reductase, large subunit |
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| Protein accession | YP_525527 |
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| Protein GI | 90019700 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0627] Predicted esterase |
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| TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.649739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTAA CAAAAGTAAG CAGCGCAAAA GTAGCCGGTG GCTGGCACCA ACAATTTAGC
CATAGCGCTA CAAGCACTGC CTGCGCTATG CGGTTTGCCA TTTTTTTACC GCCGCAAGCC
GGCCCAAATA ACCCAGTGCC GGTGGTGTAT TGGCTTTCTG GTTTAACCTG CACCGATGAA
AACTTTATGC AAAAAGCCGG CGCATTTAAA AAAGCCGCCG AGTTGGGGTT AGCCATTGTT
GCCCCCGACA CTAGCCCGCG CGGCGACGGC GTAGCAGACG ACCCAGAAGG CAGTTACGAC
TTTGGTTTAG GCGCAGGCTT TTACGTAAAC GCCACCCAAC AACCCTTTGC TAAACACTAC
CAAATGTACA CCTATGTAGT AGAAGAGTTA CCGGCGCTTA TAGAAGCCAA CTTTCCGGTT
ACTAGCCAAC GCGCAATAAG CGGCCATTCC ATGGGCGGCC ACGGCGCGCT AATGATTGCC
CTGCGCAACC CCAGTTTATT TAGCTCTGTT ACCGCATTCA GCCCAATAGC ACACCCCACA
GAATGCCCCT GGGGTGTAAA AGCATTTACA GGGTACTTAG GCGAAGATAA AAAAATATGG
ACGCAGTATG ACAGCACACT GCTAATGCAA AATAAATCCA CCGGCCCCGC CGCCCTAGTC
GACCAAGGCG ACGCCGATAA TTTTTTACAA CAACAATTAA AACCCGAACA CCTACAGCAA
GCAGCCAAAC AAAGCGGTTA TCCACTTACA TTACGCATGC AAGCCGGTTA CGACCACAGC
TACTTTTTTA TTAGTAGTTT TATCGATGAG CATTTGGCGT TTCATGCACA GAGGTTTGGG
TGA
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| Protein sequence | MTLTKVSSAK VAGGWHQQFS HSATSTACAM RFAIFLPPQA GPNNPVPVVY WLSGLTCTDE
NFMQKAGAFK KAAELGLAIV APDTSPRGDG VADDPEGSYD FGLGAGFYVN ATQQPFAKHY
QMYTYVVEEL PALIEANFPV TSQRAISGHS MGGHGALMIA LRNPSLFSSV TAFSPIAHPT
ECPWGVKAFT GYLGEDKKIW TQYDSTLLMQ NKSTGPAALV DQGDADNFLQ QQLKPEHLQQ
AAKQSGYPLT LRMQAGYDHS YFFISSFIDE HLAFHAQRFG
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