Gene Sde_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0049 
Symbol 
ID3965357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp53230 
End bp53724 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content39% 
IMG OID637919108 
Producthypothetical protein 
Protein accessionYP_525525 
Protein GI90019698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACA ATATATACGA ACCACCACAA TCAAACGTCA CGCCGCCTAC TGGCCCAGGC 
AAAGGCAATA GTGGTCGCGC TATACCGCTA ACGTTAATAT TCGATTATGG CGTTACCCAT
TTACTTACGT TTATTGTGGC TGCTTTTATT ACATCTTTCT ATATGTCGCA GGGTAAAAGC
CTAGAAGACA TCACCGCAAT ATTCGAAGCT GCCGGTCTTT TCTCTTCTAT AAATATTCTA
TTTTTAGCGG TGGGCCTAAG CGTAAGCTTT GTATCTGGCT ATATGTGCGC AAAGTGGTCG
GTAAAAAATG TATGGCGCGA TATAGTTATA GTAATGGTTA TATCCCAAGT AATAGAAACT
TTTTTATATT GGGATAGATT AAGTTTTGGA GAGTACATGT TTCTAACCGC ACTAGATACC
ACTGCAATGG TATTGGGTGT AAACCGTTGG ATTAAACAGC ACAAAAGATA TTGGAATAAA
CCAGATATAC ATTAG
 
Protein sequence
MSNNIYEPPQ SNVTPPTGPG KGNSGRAIPL TLIFDYGVTH LLTFIVAAFI TSFYMSQGKS 
LEDITAIFEA AGLFSSINIL FLAVGLSVSF VSGYMCAKWS VKNVWRDIVI VMVISQVIET
FLYWDRLSFG EYMFLTALDT TAMVLGVNRW IKQHKRYWNK PDIH