Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0042 |
Symbol | |
ID | 3965350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 47519 |
End bp | 48145 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637919101 |
Product | hypothetical protein |
Protein accession | YP_525518 |
Protein GI | 90019691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0511047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC TAGACGAAGC CCAGCAGCCC CCAGCAAAGC GCAATAACAA GCCGCTTATT GCGATACTTC TAATTAGTAT TTTCCCAATA CTCGCTGCCT ATACGATGTT TTTTACCGGT GTGGGTGTAC CCGCAGATAC TAAAAACAAA GGCTACCTAA TTACCCCTGC GGTGAATGTT TCAGTATTAC TCGAAGGCGA CAACGCTAGC GTATTAAACG ATTGGCAAAC GCATAAAAAA TGGCGATTGC TTATTCCTGT GCAAGCGCCT TGTAATCAAG CTTGCCAAGA TGACCTATAC ACAAGTCGTC AGGTGCATAT ACGTTTGGGT GAAAAAAGCA CCCGAGTACA GCGAATTGCT GTTAGCTTAA ATGGTGCGCA AAGCGACCAA TACTTAGCAG ATATTGCAAA GGACCATCCG CAACTAAAAA ATATAAGTGT TGATCCAAAT GATTGGAATG CTTGGTTAGC GCAAACCAAC TTACCAACGG AATTGGATGC CGAGCATTTT TATATACTGG TGGATCAAGA AGGCTACGCC ATGATGTGGT ACACACCGGC CATACACGGT AACGATTTAC TTAAAGATTT GAAGCACGCA TTAAAATTTT CAATCGATTA CGAATAA
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Protein sequence | MTTLDEAQQP PAKRNNKPLI AILLISIFPI LAAYTMFFTG VGVPADTKNK GYLITPAVNV SVLLEGDNAS VLNDWQTHKK WRLLIPVQAP CNQACQDDLY TSRQVHIRLG EKSTRVQRIA VSLNGAQSDQ YLADIAKDHP QLKNISVDPN DWNAWLAQTN LPTELDAEHF YILVDQEGYA MMWYTPAIHG NDLLKDLKHA LKFSIDYE
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