| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0036 |
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| Symbol | |
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| ID | 3968169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 42043 |
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| End bp | 43179 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919095 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_525512 |
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| Protein GI | 90019685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAGTA TTAACAAGCG GTCGCTCGCT CTGTTGTTCT CTGGGGTATC TCTAACGTTG
CTATCAGCGT TAGCGGGGGC CGGCGAATGG CAGCTCAATA TGACCGAGGG TGTCACTTCT
ATCAGTAAAG AAGTGTATGG CCTACACATG CTGATCTTTT ACATTTGCTG CGCTATTGGC
GTACTTGTAT TTGGTGCAAT GTTTATCAGT ATGTATTTGC ACAGAAAATC GAGGGGCGCT
GAGGCATCCC ACTTCCATGA GAGTGTCAAA CTCGAGCTTT TATGGACAAT AGTTCCCGCC
TTAATTCTTA TTGGTATGGC GTTTCCAGCC ACCAAAACTC TCACCAAAAT CTACGATACC
GACAACGCCG ACCTAGATAT CCTTGTTACG GGTTATCAAT GGAAGTGGAA ATACGAGTAT
ATAGGTCAAG ATGTGAGTTT CTTCGCCAAC TTAAGTGATG CCTCTAAGGC AGAAATCTTT
AACGGTGAAG CAAAATCTGA ACACTACCTG CTAGATACCG ACAAGGTATT GATGATTCCT
ACCGGCAAAA AAGTACGCTT TTTGGTGACC TCTGCCGATG TAATCCACAG CTGGTGGGTA
GCCGATCTAG CCGTTAAGCG CGATGCAATT CCCGGCTATA TCAACGAATC ATGGACGCGA
GTAGACGAAC CCGGTTTATT CCGCGGTCAG TGTGCTGAGC TGTGCGGTAA AGATCACGGC
TTTATGCCTA TTGTGGTTAA AGCTGTTACC CCAGAAGAGT TCGACGCTTG GCTAGCTCAA
AAACGCGAAG AAGCGGCGGC CATTGCCGAA GCGGCTAAGC AAACTCTTAG CTTCGATGAG
CTATATGCTC AGGGCGAGGC GGTTTACAAC AGCCAGTGTT CTGCTTGTCA CCAACCAGAT
GGTAAAGGTA TAGCGGGTAC ATTCCCTGCT ATTGCGGGCA GCCCGCTAGC CATGGGTGAT
GTTGTGGGCC ACTTAGATCG CGTTATTAAC GGCGGTCAGG GTATGCCACC GTTTGGCGAA
CAGCTAACAC CTGTTGAAGC GGCAGCAGTT ATTACCTTTC AGCGAAACGC GTTTGGCAAC
AATATGGGCG ATCAAGTCCA GCCAATCGAC GTTGTGAACT TTAAGCAAGG CCAATAG
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| Protein sequence | MLSINKRSLA LLFSGVSLTL LSALAGAGEW QLNMTEGVTS ISKEVYGLHM LIFYICCAIG
VLVFGAMFIS MYLHRKSRGA EASHFHESVK LELLWTIVPA LILIGMAFPA TKTLTKIYDT
DNADLDILVT GYQWKWKYEY IGQDVSFFAN LSDASKAEIF NGEAKSEHYL LDTDKVLMIP
TGKKVRFLVT SADVIHSWWV ADLAVKRDAI PGYINESWTR VDEPGLFRGQ CAELCGKDHG
FMPIVVKAVT PEEFDAWLAQ KREEAAAIAE AAKQTLSFDE LYAQGEAVYN SQCSACHQPD
GKGIAGTFPA IAGSPLAMGD VVGHLDRVIN GGQGMPPFGE QLTPVEAAAV ITFQRNAFGN
NMGDQVQPID VVNFKQGQ
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