| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0025 |
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| Symbol | |
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| ID | 3968158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 28757 |
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| End bp | 29668 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919084 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_525501 |
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| Protein GI | 90019674 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT CCAATAAGCA AGCCGTTAAA GCCTACCTAT TAAACCTGCA GGACAAAATC
TGCCAAGTCT TGGCTGCGGT GGACGGCAAA GAAACTTTTG TTGAAGATTC TTGGCAAAGG
CCAGAAGGCG GCGGCGGTCG CTCTAGGGTG CTCACCAATG GCGCCGTAAT AGAAAAAGGT
GGGGTAAACT TTTCCCACGT GCACGGCTCC TCAATGCCTG CATCGGCTAC TGCGCACAGG
CCAGAGCTTG CCGGCCGCAG TTTCGAAGCA ATGGGGGTAT CGCTGGTTAT TCACCCCAAT
AACCCACATG TACCAACCAG CCACGCCAAT GTACGGTTTT TTATCGCCGA AAAAGAGGGC
GCCGAGCCTG TTTGGTGGTT TGGTGGTGGT TATGATTTAA CCCCTTATTA CGGCAACGAT
GAAGACTGTC GCCACTGGCA CAATACGGCC AAGGCCGCTT GCGCGCCTTT TGGTGAAGAT
AAATACCCGC GCTACAAAAA ATGGTGTGAT GAATACTTTT ACTTGAAACA CCGCGATGAG
CCGCGCGGTG TGGGTGGTTT ATTTTTTGAC GACCTGAATG AGCTGGGCTT TGACCAGAGC
TTTGCTTTTA TGCAGGCTGT GGGCGACAGC TACACCCAAG CCTATGTGCC CATTGTAGAG
CGCAGAAAAG ACGAGCCCTA TAACCAAGCG CAACGGGATT TTCAGCTCTA CCGTCGCGGT
CGTTATGTGG AATTTAATTT GGTGTACGAT CGCGGTACGC TATTCGGCTT ACAAACCGGT
GGTCGCACAG AGTCTATTCT TATGAGCTTA CCGCCCCTTG TGCGCTGGGA ATACGATTGG
CAACCACAGC CCAATACACC AGAAGCGCGT TTATACGAAC ATTATTTGCA GCCGCAAGAC
TGGGCTGAAT AG
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| Protein sequence | MTASNKQAVK AYLLNLQDKI CQVLAAVDGK ETFVEDSWQR PEGGGGRSRV LTNGAVIEKG
GVNFSHVHGS SMPASATAHR PELAGRSFEA MGVSLVIHPN NPHVPTSHAN VRFFIAEKEG
AEPVWWFGGG YDLTPYYGND EDCRHWHNTA KAACAPFGED KYPRYKKWCD EYFYLKHRDE
PRGVGGLFFD DLNELGFDQS FAFMQAVGDS YTQAYVPIVE RRKDEPYNQA QRDFQLYRRG
RYVEFNLVYD RGTLFGLQTG GRTESILMSL PPLVRWEYDW QPQPNTPEAR LYEHYLQPQD
WAE
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