| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0013 |
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| Symbol | glyQ |
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| ID | 3968832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 15577 |
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| End bp | 16533 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919072 |
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| Product | glycyl-tRNA synthetase subunit alpha |
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| Protein accession | YP_525489 |
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| Protein GI | 90019662 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.583173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAAAAC CGGATGTATC AACCTTTCAA GGTTTGATTC TGGCCCTGCA AGAGTACTGG
GCTAAACAAG GCTGTGTTGT TCTACAACCC TTAGATATGG AAGTAGGCGC AGGTACATTT
CACCCCGCTA CTTTCCTGCG CGCCATAGGC CCAGAAACTT GGAACACTGC CTATGTACAG
CCCTGCCGTC GCCCTACCGA TGGCCGCTAC GGCGAAAACC CAAACCGGTT GCAGCACTAC
TACCAATTCC AAGTTGCGTT AAAACCCTCG CCCGATAATA TCCAAGAGCT TTACTTGGGT
TCGTTGGCAC ACTTGGGCCT AGATACCAAT ATTCACGATA TTCGCTTTGT GGAAGATAAC
TGGGAATCGC CAACGCTTGG CGCCTGGGGC TTGGGCTGGG AAGTGTGGCT TAACGGTATG
GAAGTTACCC AGTTTACTTA CTTCCAACAG GTTGGCGGTT TAGAGTGCTA CCCCGTTACC
GGCGAAATTA CCTATGGGCT TGAGCGTATA GCCATGTACC TGCAGGACGT AAACTCTATT
TACGACCTAG TATGGACCAA GCGCCCAGAC GGCGGCATTG TGACCTACGG CGATGTATTC
CACCAAAACG AAGTAGAAAT GTCACACTTC AACTTTTCGG AAGCCAACGT TGAGTTTTTA
TTTCAAACCT TCGACGTGTG CGAAGCCGAA TCGCGCCGGC TTATAGAAAA AGGCCTGCCC
CTGCCCGCTT ACGAAATGGT TATGAAAGCC TCTCACGCTT TTAATTTGCT AGATGCGCGT
CAGGCTATTT CGGTTACCGA GCGCCAGCGC TTTATTTTGC GCGTGCGCAC CTTGGCCCGC
GATGTTGCCC AAGCTTATTT CGATGCCCGC CTAAAACTTG GCTTCCCGTT AGCAGACCCA
AAACTGCGCG ACGAAGTAAT AGCCCGAGTG GAAGCTGAGA TGGAGAAAAA AGCATGA
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| Protein sequence | MSKPDVSTFQ GLILALQEYW AKQGCVVLQP LDMEVGAGTF HPATFLRAIG PETWNTAYVQ
PCRRPTDGRY GENPNRLQHY YQFQVALKPS PDNIQELYLG SLAHLGLDTN IHDIRFVEDN
WESPTLGAWG LGWEVWLNGM EVTQFTYFQQ VGGLECYPVT GEITYGLERI AMYLQDVNSI
YDLVWTKRPD GGIVTYGDVF HQNEVEMSHF NFSEANVEFL FQTFDVCEAE SRRLIEKGLP
LPAYEMVMKA SHAFNLLDAR QAISVTERQR FILRVRTLAR DVAQAYFDAR LKLGFPLADP
KLRDEVIARV EAEMEKKA
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