| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0011 |
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| Symbol | |
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| ID | 3968830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 12672 |
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| End bp | 13394 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919070 |
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| Product | Protoheme IX farnesyltransferase |
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| Protein accession | YP_525487 |
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| Protein GI | 90019660 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTTCTG TTCGCAATAC TGTTTTCACA ATTGTTTATG CGCTTAGCGT TATATTTTAC
GGCACACTTT CGTTAACGCT TTATGTGTTA CCTACGCGTG CAAGGCACAA AATTATATCC
ACTTGGACAA ACTTTATTAT TTGGTGGCTA AAAATTAGCT GCAATATAAA CCACAAACTA
GTGGGTGCAG AGAATATAAA AAACCTCCAA TCGCCTGTAG TGGTTATGTC TAAACACCAA
AGCGCATGGG AAACGTTTTT TCTGCAAACA ATTTTTTGGC CGTCTTCAAC CATATTAAAA
AAGGAGCTAG TAAAAATACC TTTTTTTGGT TGGGGTTTAT TGGGTTTGAA CCCAATACCT
ATAGATAGAA GCAACCCGCG CGAGGCACTC AAGCAAGTAA AAGCCGGTGG CTTAAAGCGC
ATAGAAGACG GCTATAACTT AATTATTTTT CCTGAAGGTA CACGCTTGGC ACCGGGCGAG
CGCAAGAAAT ATGCGCGCAG TGGTGCAGAT ATTGCGGTGG CCTGCGGCGC CGATGTGATT
CCGGTTGCGC ACAATGCTGG CACCTGTTGG CCAGCCCGCA AAAAAGGCAA AATAGCCGGC
ATGATAGATA TTCACATAGG CCAACCTATT TCTACTGCCG GCAAAACCAG TAAACAAGTA
ATAGACGAAG TGGAAAACTG GATTGAATCC ACCATGGAAA CCTTACCGTT AAAGCAGGCT
TAA
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| Protein sequence | MSSVRNTVFT IVYALSVIFY GTLSLTLYVL PTRARHKIIS TWTNFIIWWL KISCNINHKL
VGAENIKNLQ SPVVVMSKHQ SAWETFFLQT IFWPSSTILK KELVKIPFFG WGLLGLNPIP
IDRSNPREAL KQVKAGGLKR IEDGYNLIIF PEGTRLAPGE RKKYARSGAD IAVACGADVI
PVAHNAGTCW PARKKGKIAG MIDIHIGQPI STAGKTSKQV IDEVENWIES TMETLPLKQA
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