Gene Sde_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0007 
Symbol 
ID3968826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp9715 
End bp10098 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content36% 
IMG OID637919066 
Producthypothetical protein 
Protein accessionYP_525483 
Protein GI90019656 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.146803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.457829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT TACCAACATC GTCGAATTCA GAATTTAAAC CGTGGGGTAT GGAAGAAAAC 
GTATTTATAA TGTTGATGCA TTTATCTCAG CTTACTGGCT TTATTATTCC ATTCGGCGGC
CTAATTTTAC CGATTGTTAT GTGGGCAACC AATAAAGACC AAAGCGAGAA TATTAATAAA
CACGGTAAAG TAGTGTTGAA CTGGGTAATT AGTTCTACTA TTTACTGCGT TGTAGCCTTT
ATGCTAATTG CTCTAGTAAT TGGTATACCG CTTTTAATTG GTGTGTGTAT TACTAGCTTG
GTGTTTATTG TTATTGGCGC TATTAAAGCA AACAATGGCG AGCTTTGGCC CTACCCAATT
AGCATCAAAT TTTTTAAAGT GTAA
 
Protein sequence
MSELPTSSNS EFKPWGMEEN VFIMLMHLSQ LTGFIIPFGG LILPIVMWAT NKDQSENINK 
HGKVVLNWVI SSTIYCVVAF MLIALVIGIP LLIGVCITSL VFIVIGAIKA NNGELWPYPI
SIKFFKV