| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0001 |
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| Symbol | dnaA |
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| ID | 3968820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 383 |
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| End bp | 1957 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919060 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_525477 |
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| Protein GI | 90019650 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0237228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.131634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTGC CTGAATCTGC GTGGGAGCAA TGTGTCTCTA GTTTGCAAAG TGAATTGCCG
GCACAACAGT TTAATACCTG GATACGCCCC CTGCGTGTGC AGCAAGCAGA AGCCAGTAAT
CAGCTCCACT TAATTGCGCC TAACCGCTTT GTATTGGATT GGGTGAACGA CAAGTTTAAA
AGCCGTATAG ATGAGCTGTT GTCCTCCGCC GATCACCATC CTATTACTAG CGTAGAAATT
AGTGTTGCGC CTAGACGTTC CACTAGCTTT GAAACCAACC AAGGTGTTGC TGCACGGCAA
AAAAGGCAGC AAGAGGCGCC GCGACAAAAT ATAGCGTCAA GCCAACCCTC AAATAGTTAT
AGTCGGCAAC CCCAGCAGCC AGCGGTTGAA ATGCCAGCCG AGTCGCAAAT GGCCCAGGTT
GAATTATTGC CTGCTGCACC GCCAGCGCCA CTTAATAATG GCTACAACAC TGAATCTTTC
GCGCAACCCT ATAACGATAA CCCTATGGGG CAGGGCAAAG TAGATAAAGT GGATGTAGAG
GGCGGTTTAC AGCACAAGTC TAATCTTAAC CCTACCTTTA TATTCGATAA CTTTGTTGTG
GGTAAATCCA ACCAGCTTGG CTTGGCCGCT GCCACGCAGG TAGCAGAAAA CCCCGGTGGT
TCGTATAACC CGCTTTTTAT ATATGGCGGT GTAGGTTTAG GTAAAACTCA CTTAATGCAC
GCGGTAGGTA ACGCGCTTTG TGTGCGCAAG CCCGGTGCCA AGGTGGTTTA CCTGCATTCT
GAGCGTTTTG TTGCCGATAT GGTAAAAGCG CTGCAGTTAA ACGCCATTAA CGATTTTAAA
CGTTATTACC GCTCGGTAGA TGCATTACTT ATTGATGATA TTCAGTTCTT CGCAGGTAAA
GAACGGTCGC AGGAGGAGTT CTTCCATACG TTTAATGCGC TTTTGGAAGG CGGTCAGCAA
ATTATTTTAA CCTGCGACAG ATACCCTAAA GAAATCAATG GCTTAGAGGA GCGTCTCAAA
TCCCGCTTTG GCTGGGGGTT AACTGTTGCT ATCGAACCGC CAGAGTTAGA AACCCGCGTG
GCAATATTAA AGCGCAAAGC AGAGCAGGTG GGCGCCCCTT TACCTAACGA CGCGGCATTC
TTTATTGCCC AGCGTATACG CTCTAACGTG CGTGAGTTAG AAGGAGCACT AAAGCGTGTG
ATAGCCAATG CCCACTTTAC CGGCAGAGAT ATTTCGGTAG AGCTTGTGCG CGAAGCACTT
AAAGATTTGT TGGCCCTGCA AGACCGCCTA GTAAGTATCG ATAACATTCA GCGCGTAGTA
GCCGAGTATT ACAAAATTAA AGTATCGGAT CTGCACTCTA AAAGGCGCAG CCGTTCAGTA
GCACGGCCTA GGCAAGTGGC AATGTATTTA GCGAAAGACC TAACACACCA CAGTTTGCCC
GAAATTGGCG AAGCGTTTGG TGGGCGAGAC CACACAACGG TTTTGCACGC ATGCCGTAAA
ATTAAAGAAA TGATCGAGTC GGACGCAGAT ATTAGAGAAG ATGTTAAGAA TCTTTTGCGT
ACACTCACCA CCTAA
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| Protein sequence | MELPESAWEQ CVSSLQSELP AQQFNTWIRP LRVQQAEASN QLHLIAPNRF VLDWVNDKFK
SRIDELLSSA DHHPITSVEI SVAPRRSTSF ETNQGVAARQ KRQQEAPRQN IASSQPSNSY
SRQPQQPAVE MPAESQMAQV ELLPAAPPAP LNNGYNTESF AQPYNDNPMG QGKVDKVDVE
GGLQHKSNLN PTFIFDNFVV GKSNQLGLAA ATQVAENPGG SYNPLFIYGG VGLGKTHLMH
AVGNALCVRK PGAKVVYLHS ERFVADMVKA LQLNAINDFK RYYRSVDALL IDDIQFFAGK
ERSQEEFFHT FNALLEGGQQ IILTCDRYPK EINGLEERLK SRFGWGLTVA IEPPELETRV
AILKRKAEQV GAPLPNDAAF FIAQRIRSNV RELEGALKRV IANAHFTGRD ISVELVREAL
KDLLALQDRL VSIDNIQRVV AEYYKIKVSD LHSKRRSRSV ARPRQVAMYL AKDLTHHSLP
EIGEAFGGRD HTTVLHACRK IKEMIESDAD IREDVKNLLR TLTT
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