Gene Rfer_R0050 details

Gene Information

• Locus tag: Rfer_R0050
• ID: 3962332
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 4109136
• End bp: 4112015
• Gene Length: 2880 bp
• GC content: 51%
• IMG OID: 640713262
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.6901
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGTCAAGTGA ATAAGAGCAT GTGGTGGATG CCTTGGCAAT GATAGGCGAC GAAGGACGTG 
ATAGCCTGCG ATAAGCTTCG GGGAGCTGGC AAATTAGCTT TGATCCGGAG ATTTCCGAAT 
GGGGAAACCC ACCGAAAGGT ATCGCATACT GAATACATAG GTATGCGAGG CGAACCGGGT 
GAACTGAAAC ATCTCAGTAG CTCGAGGAAA AGACATCAAC CGAGATTCCG AAAGTAGTGG 
CGAGCGAAAT CGGAGAAGCC TGCAAGTGAT AGCACAAGAC TTAACAGAAC AGCTTGGAAA 
GGCTGGCCAT AGCGGGTGAT AGCCCCGTAT GTGAAAAGAC CTGTGTGATA CTGAGCTTGC 
GACAAGTAGG GCGGGACACG TGTAATCCTG TCTGAATATG GGGGGACCAT CCTCCAAGGC 
TAAATACTCA TCATTGACCG ATAGTGAACT AGTACCGTGA GGGAAAGGCG AAAAGAACCC 
CGGGAGGGGA GTGAAATAGA TCCTGAAACC GCATGCTTAC AAAAAGTAGG AGCCCGCAAG 
GGTGACTGCG TACCTTTTGT ATAATGGGTC AGCGACTTAC ATTCAGTGGC AAGGTTAACC 
GAATAGGGAA GCCGTAGAGA AATCGAGTCC GAATAGGGCG AATTAGTCGC TGGGTGTAGA 
CCCGAAACCA AGTGATCTAT CCATGGCCAG GATGAAGGTG CCGTAACAGG TACTGGAGGT 
CCGAACCGAC TAGTGTTGCA AAACTAGCGG ATGAGCTGTG GATAGGGGTG AAAGGCTAAA 
CAAACTTGGA AATAGCTGGT TCTCTCCGAA AACTATTTAG GTAGTGCCTC AAGTATTACC 
GTTGGGGGTA GAGCACTGTT TTGGCTAGGG GGTCATGGCG ACTTACCAAA CCAAGGCAAA 
CTCCGAATAC CGACGAGTAC AGCTTGGGAG ACAGAGCACC GGGTGCTAAC GTCCGGACTC 
AAGAGGGAAA CAACCCAGAC CGCCAGCTAA GGTCCCTAAA ATTGGCTAAG TGGGAAACGA 
AGTGGGAAGG CTAAAACAGT CAGGATGTTG GCTTAGAAGC AGCCATCATT TAAAGAAAGC 
GTAATAGCTC ACTGATCGAG TCGTCCTGCG CGGAAGATGT AACGGGGCTA AGCCAGTTAC 
CGAAGCTGCG GATTTGCAAT TTATTGCAAG TGGTAGGAGA GCGTTCTGTA AGCCTGTGAA 
GGTGCGTTGT AAAGCGTGCT GGAGGTATCA GAAGTGCGAA TGCTGACATG AGTAGCGTTA 
AAGGGGGTGA AAAGCCCCCT CGCCGTAAGC GCAAGGTTTT CTACGCAACG TTCATCGGCG 
TAGAGTGAGT CGGCCCCTAA GGCGAGGCAG AGATGCGTAG TCGATGGGAA ACAGGTCAAT 
ATTCCTGTAC CGATGTGTAG TGCGATGTGG GGACGGAGAA GGTTAGCTCA GCCAACTGTT 
GGATATGTTG GTTCAAGCCT GTAGTCGTGC CTGGTAGGTA AATCCGCCGG GCTTAGATGA 
GGGGTGATAA CGAGGCTGCT TGCAGCCGAA GTGAGTGATA CCCTGCTTCC AGGAAAAGCC 
ACTAAGCTTC AGCTACACAC GACCGTACCG CAAACCGACA CTGGTGCGCG AGATGAGTAT 
TCTAAGGCGC TTGAGAGAAC TCTGGAGAAG GAACTCGGCA AATTGACACC GTAACTTCGG 
AAGAAGGTGT GCCTTTAGTA GGTGAAGTCC CTTGCGGATG GAGCCCAATG AGGTTGCAAA 
AAATCGGTGG CTGCGACTGT TTATTAAAAA CACAGCACTC TGCAAACACG AAAGTGGACG 
TATAGGGTGT GACGCCTGCC CGGTGCTGGA AGATTAAATG ATGGGGTGCA AGCTCTTGAT 
TGAAGTCCCA GTAAACGGCG GCCGTAACTA TAACGGTCCT AAGGTAGCGA AATTCCTTGT 
CGGGTAAGTT CCGACCTGCA CGAATGGCGT AACGATGGCC ACACTGTCTC CTCCAGAGAC 
TCAGCGAAGT TGAAATGTTT GTGATGATGC AATCTCCCCG CGGAAAGACG GAAAGACCCC 
ATGAACCTTT ACTGTAGCTT TGTATTGGAC TTTGAACAGA TCTGTGTAGG ATAGGTGGGA 
GGCTTTGAAG CGGTGCCGCT AGGTATCGTG GAGCCAACGT TGAAATACCA CCCTGGTGTG 
TTTGAGGTTC TAACCTAGGT CCATTATCTG GATCGGGGAC AGTGCATGGT AGGCAGTTTG 
ACTGGGGCGG TCTCCTCCCA AAGCGTAACG GAGGAGTTCG AAGGTACGCT AGTTACGGTC 
GGACATCGTG ACGATAGTGC AATGGCATAA GCGTGCTTAA CTGCGAGACT GACAAGTCGA 
GCAGATGCGA AAGCAGGACA TAGTGATCCG GTGGTTCTGT ATGGAAGGGC CATCGCTCAA 
CGGATAAAAG GTACTCTGGG GATAACAGGC TGATACCGCC CAAGAGTTCA TATCGACGGC 
GGTGTTTGGC ACCTCGATGT CGGCTCATCT CATCCTGGGG CTGTAGCCGG TCCCAAGGGT 
ATGGCTGTTC GCCATTTAAA GAGGTACGTG AGCTGGGTTT AAAACGTCGT GAGACAGTTT 
GGTCCCTATC TTCCGTGGGC GCTGCAGATT TGAGGAAGCC TGCTCCTAGT ACGAGAGGAC 
CGGAGTGGAC GAACCTCTGG TGTACCGGTT GTCACGCCAG TGGCATTGCC GGGTAGCTAA 
GTTCGGAAGA GATAACCGCT GAAAGCATCT AAGCGGGAAA CTCGTTTCAA GATGAGATCT 
GCCGGGGCCT TGAGCCCCCT AAAGAGTCGT TCAAGACCAG GACGTTGATA GGTCAGGTGT 
GGAAGCGCAG TAATGCGTTA AGCTAACTGA TACTAATTGC TCGTGCGGCT TGACCCTATA 

 

Protein sequence