Gene Rfer_4238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4238 
Symbol 
ID3961976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4704535 
End bp4706505 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content58% 
IMG OID637919052 
Productsodium/hydrogen exchanger 
Protein accessionYP_525456 
Protein GI89902985 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACACTTC TATATTTACT GGCCGCTGTG CTGGGCGTCG TGGCGTGTCG CTCTTTGAAA 
TTGCCACCCA TGCTCGGCTA CTTGGCCGTT GGGATCGTGA TTGGACCCAA CGCTTTGGCC
TTGGCAAAAA ATGCGGACGG CGTGCGCCAT CTGGGTGAGT TTGGTGTAGT CTTTCTGATG
TTTGTCATTG GGCTGGAGTT CAATTTACCC AAGCTTCGTG CCATGCGAAG CCATGTGTTT
GGGCTTGGTT TTTTCCAGGT GCTCTTGACC ATGCTCGGCG CCACGGCAGC CATGCTGGGT
TTGGGAATGA TGGCTCCGAC GCTTTGGGGC ATGGGCTGGC AGACTGCGTT GGCACTCTCA
AGTGCGTTGG CCATGAGCAG CACCGCCATT GTGGTTAAGC TGATGACCGA ACGACTGGAG
ATGGAATCGG AGCACGGCAA ACGGGTCATG GGCGTACTGC TGTTTCAAGA TTTGGCAGTG
GTGCCGCTGT TGGTGCTGAT CCCGGCACTG GGGGTATCGG CCGAGTCGCT TTTTCAAACT
CTTGCCTTCG CCAGCCTCAA GGCGACACTT TTGATTGCTT TGCTGCTGGT CGGCGGCCCG
CGTGTGATGC GCTTTTGGCT GACGCTGGTG GCCCGGCGCA AAAGTGAAGA GTTGTTTGTC
CTGAACCTGC TGTTCATTAC ACTGGGATTG GCCTGGTTGA CAGAGATGGC GGGCCTGAGT
CTGGCATTGG GTGCCTTTAT TGCGGGTATG CTGATCTCGG AGACACAATA CAAACAACAG
GTGGAGTCGG ACATCCGTCC CTTTCACGAC GTGTTGTTGG GCCTGTTTTT TATCAGCATC
GGGATGATGC TGGATTGGCG ACTGGTGCTG GAACGTTGGC CGCTGGTGCT GTTGCTGGTC
TCCGTCCCGG TATTTTTCAA GGCAGCATTA GTGGGCCTGC TGGCACGGAG TTTGGGTGCC
ACCACAGGCG TTTCACTGCG CACCGGCCTG TACCTGGCGC AGGCTGGCGA ATTCGGTTTT
GTGTTGTTGA CACTCGCTCA ATCCAATGCA CTGGTGCCGC CCGCACTGCT TAATCCGATA
CTGGCCAGCA TGGTGCTCTC AATGTTGGCC ACACCATTTG TCATCATGTA CAGCAACCAA
ATCGTTTTGA AGTGGGTCAG CAGCGAATGG CTGCAACAGT CTCTGCAAAT GACCTCCATT
GCGCGCCAGT CGATCAAGGC CAACAAGCAT GTCATCATTT GCGGCTACGG TCGCTGCGGA
CAAAATCTGG CGCGCATGCT CGACCAGGAA AGCATACCTT ATATCGCGCT TGATCTTGAT
CCCGACCGGG TGCGCCAGGC CACCGTCGCC GGCGACTCGG TGGTATTTGG GGACGCTGCC
CGCCTGCAGG CACTGATCGC CGCCGGGCTG GCCCGGGCCA GTGCCGTCGT CATTACATAC
CTTGAAGTTC AGAGCGCCTT GAAGGTTCTG GCTCACACAC GAGACCATGC GCCGCAGGTG
CCAGTCATCG TGCGAACACA GGACGATCAC GATCTTGAGG CCCTGCGCAA GGCGGGTGCA
ACCGAGGTGG TGCCAGAGGC GATTGAAGGC TCACTGATGC TGGCCAGCCA CGCCTTGGCT
TTGGTGGGCG TACCGATGCG GCGGGTGATT CGCATTGTGC GCGACCAGCG TGATGCTCGT
TACAACCTGC TGCGCGGCTA CTTTCACGGG GCCGACGACG ATTCTGTCGA TGAGTTAGGC
CAGGATCGCC TCTCGACACT GACGCTGCCG CTTGGCGCCA AAGTCGTGGG CAAGCCGCTC
AGCCAGCTGG CCCTATTGGC AGTAGATGTC CGCATCGTCA GCCTGCGCCG CAGCGGAGGG
CATGTCAAGT CTGTCAACCC GGATTTGCTG ATAGAGGAGG GCGACACACT CGTGCTTTCG
GGCAAGACCG AGGCACTCGC GTTAGCCGAG CAGAAATTGC TCAAGGGTTG A
 
Protein sequence
MTLLYLLAAV LGVVACRSLK LPPMLGYLAV GIVIGPNALA LAKNADGVRH LGEFGVVFLM 
FVIGLEFNLP KLRAMRSHVF GLGFFQVLLT MLGATAAMLG LGMMAPTLWG MGWQTALALS
SALAMSSTAI VVKLMTERLE MESEHGKRVM GVLLFQDLAV VPLLVLIPAL GVSAESLFQT
LAFASLKATL LIALLLVGGP RVMRFWLTLV ARRKSEELFV LNLLFITLGL AWLTEMAGLS
LALGAFIAGM LISETQYKQQ VESDIRPFHD VLLGLFFISI GMMLDWRLVL ERWPLVLLLV
SVPVFFKAAL VGLLARSLGA TTGVSLRTGL YLAQAGEFGF VLLTLAQSNA LVPPALLNPI
LASMVLSMLA TPFVIMYSNQ IVLKWVSSEW LQQSLQMTSI ARQSIKANKH VIICGYGRCG
QNLARMLDQE SIPYIALDLD PDRVRQATVA GDSVVFGDAA RLQALIAAGL ARASAVVITY
LEVQSALKVL AHTRDHAPQV PVIVRTQDDH DLEALRKAGA TEVVPEAIEG SLMLASHALA
LVGVPMRRVI RIVRDQRDAR YNLLRGYFHG ADDDSVDELG QDRLSTLTLP LGAKVVGKPL
SQLALLAVDV RIVSLRRSGG HVKSVNPDLL IEEGDTLVLS GKTEALALAE QKLLKG