Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4238 |
Symbol | |
ID | 3961976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4704535 |
End bp | 4706505 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637919052 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_525456 |
Protein GI | 89902985 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACACTTC TATATTTACT GGCCGCTGTG CTGGGCGTCG TGGCGTGTCG CTCTTTGAAA TTGCCACCCA TGCTCGGCTA CTTGGCCGTT GGGATCGTGA TTGGACCCAA CGCTTTGGCC TTGGCAAAAA ATGCGGACGG CGTGCGCCAT CTGGGTGAGT TTGGTGTAGT CTTTCTGATG TTTGTCATTG GGCTGGAGTT CAATTTACCC AAGCTTCGTG CCATGCGAAG CCATGTGTTT GGGCTTGGTT TTTTCCAGGT GCTCTTGACC ATGCTCGGCG CCACGGCAGC CATGCTGGGT TTGGGAATGA TGGCTCCGAC GCTTTGGGGC ATGGGCTGGC AGACTGCGTT GGCACTCTCA AGTGCGTTGG CCATGAGCAG CACCGCCATT GTGGTTAAGC TGATGACCGA ACGACTGGAG ATGGAATCGG AGCACGGCAA ACGGGTCATG GGCGTACTGC TGTTTCAAGA TTTGGCAGTG GTGCCGCTGT TGGTGCTGAT CCCGGCACTG GGGGTATCGG CCGAGTCGCT TTTTCAAACT CTTGCCTTCG CCAGCCTCAA GGCGACACTT TTGATTGCTT TGCTGCTGGT CGGCGGCCCG CGTGTGATGC GCTTTTGGCT GACGCTGGTG GCCCGGCGCA AAAGTGAAGA GTTGTTTGTC CTGAACCTGC TGTTCATTAC ACTGGGATTG GCCTGGTTGA CAGAGATGGC GGGCCTGAGT CTGGCATTGG GTGCCTTTAT TGCGGGTATG CTGATCTCGG AGACACAATA CAAACAACAG GTGGAGTCGG ACATCCGTCC CTTTCACGAC GTGTTGTTGG GCCTGTTTTT TATCAGCATC GGGATGATGC TGGATTGGCG ACTGGTGCTG GAACGTTGGC CGCTGGTGCT GTTGCTGGTC TCCGTCCCGG TATTTTTCAA GGCAGCATTA GTGGGCCTGC TGGCACGGAG TTTGGGTGCC ACCACAGGCG TTTCACTGCG CACCGGCCTG TACCTGGCGC AGGCTGGCGA ATTCGGTTTT GTGTTGTTGA CACTCGCTCA ATCCAATGCA CTGGTGCCGC CCGCACTGCT TAATCCGATA CTGGCCAGCA TGGTGCTCTC AATGTTGGCC ACACCATTTG TCATCATGTA CAGCAACCAA ATCGTTTTGA AGTGGGTCAG CAGCGAATGG CTGCAACAGT CTCTGCAAAT GACCTCCATT GCGCGCCAGT CGATCAAGGC CAACAAGCAT GTCATCATTT GCGGCTACGG TCGCTGCGGA CAAAATCTGG CGCGCATGCT CGACCAGGAA AGCATACCTT ATATCGCGCT TGATCTTGAT CCCGACCGGG TGCGCCAGGC CACCGTCGCC GGCGACTCGG TGGTATTTGG GGACGCTGCC CGCCTGCAGG CACTGATCGC CGCCGGGCTG GCCCGGGCCA GTGCCGTCGT CATTACATAC CTTGAAGTTC AGAGCGCCTT GAAGGTTCTG GCTCACACAC GAGACCATGC GCCGCAGGTG CCAGTCATCG TGCGAACACA GGACGATCAC GATCTTGAGG CCCTGCGCAA GGCGGGTGCA ACCGAGGTGG TGCCAGAGGC GATTGAAGGC TCACTGATGC TGGCCAGCCA CGCCTTGGCT TTGGTGGGCG TACCGATGCG GCGGGTGATT CGCATTGTGC GCGACCAGCG TGATGCTCGT TACAACCTGC TGCGCGGCTA CTTTCACGGG GCCGACGACG ATTCTGTCGA TGAGTTAGGC CAGGATCGCC TCTCGACACT GACGCTGCCG CTTGGCGCCA AAGTCGTGGG CAAGCCGCTC AGCCAGCTGG CCCTATTGGC AGTAGATGTC CGCATCGTCA GCCTGCGCCG CAGCGGAGGG CATGTCAAGT CTGTCAACCC GGATTTGCTG ATAGAGGAGG GCGACACACT CGTGCTTTCG GGCAAGACCG AGGCACTCGC GTTAGCCGAG CAGAAATTGC TCAAGGGTTG A
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Protein sequence | MTLLYLLAAV LGVVACRSLK LPPMLGYLAV GIVIGPNALA LAKNADGVRH LGEFGVVFLM FVIGLEFNLP KLRAMRSHVF GLGFFQVLLT MLGATAAMLG LGMMAPTLWG MGWQTALALS SALAMSSTAI VVKLMTERLE MESEHGKRVM GVLLFQDLAV VPLLVLIPAL GVSAESLFQT LAFASLKATL LIALLLVGGP RVMRFWLTLV ARRKSEELFV LNLLFITLGL AWLTEMAGLS LALGAFIAGM LISETQYKQQ VESDIRPFHD VLLGLFFISI GMMLDWRLVL ERWPLVLLLV SVPVFFKAAL VGLLARSLGA TTGVSLRTGL YLAQAGEFGF VLLTLAQSNA LVPPALLNPI LASMVLSMLA TPFVIMYSNQ IVLKWVSSEW LQQSLQMTSI ARQSIKANKH VIICGYGRCG QNLARMLDQE SIPYIALDLD PDRVRQATVA GDSVVFGDAA RLQALIAAGL ARASAVVITY LEVQSALKVL AHTRDHAPQV PVIVRTQDDH DLEALRKAGA TEVVPEAIEG SLMLASHALA LVGVPMRRVI RIVRDQRDAR YNLLRGYFHG ADDDSVDELG QDRLSTLTLP LGAKVVGKPL SQLALLAVDV RIVSLRRSGG HVKSVNPDLL IEEGDTLVLS GKTEALALAE QKLLKG
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