| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4224 |
|---|
| Symbol | |
|---|
| ID | 3961942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4696611 |
|---|
| End bp | 4697042 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637919038 |
|---|
| Product | ribosomal protein L15 |
|---|
| Protein accession | YP_525442 |
|---|
| Protein GI | 89902971 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000785273 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTA ATGGCATTAA GCCCGCTGAC GGCGCAAAGC ATTACAAGCG TCGTGTTGGT
CGTGGTATCG GCTCCGGCAT TGGAAAAACC GCAGGTCGGG GGCACAAGGG TCAAAAGTCT
CGTGCTGGTG GCTATCACAA AGTCGGTTTC GAGGGGGGTC AGATGCCTAT GCAGCGTCGG
CTACCAAAGC GAGGTTTCAA GTCTCAATTG CTGAAGTTCA ATGCCGAGGT GACCTTGAGC
GCGTTGGAGC AGCTGGGCGC TAGTGAGGTG GATTTGGTTA CCCTGAAGCA AGCTGGCCTG
GTGGGAGAGC TGGCTAAGGT CGTAAAAGTA ATTATGACGG GCAAAATCAG TAAGGCTGTG
AAACTAACTG GTATTGGTGC AACAGCGGCC GCCAAGGTGG CTATTGAAGC TGCCGGCGGA
AGTCTCGCGT AA
|
|---|
| Protein sequence | MELNGIKPAD GAKHYKRRVG RGIGSGIGKT AGRGHKGQKS RAGGYHKVGF EGGQMPMQRR
LPKRGFKSQL LKFNAEVTLS ALEQLGASEV DLVTLKQAGL VGELAKVVKV IMTGKISKAV
KLTGIGATAA AKVAIEAAGG SLA
|
|---|
| |