Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4218 |
Symbol | rpsD |
ID | 3961936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4693331 |
End bp | 4693954 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637919032 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_525436 |
Protein GI | 89902965 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCACGTT ATCTCGGCCC CAAGGCCAAA TTATCCCGCC GTGAAGGCAC TGACCTGTTT TTAAAGAGCG CACGTCGTTC AATTGGAGAC AAGGCTAAAT TTGACTCTAA ACCAGGTCAA CACGGGCGCA CGTCGGGCGC ACGTACATCC GACTTTGGCC TGCAACTTCG TGAGAAGCAA AAGGTCAAGC GTATGTATGG GGTTCTGGAG AAGCAGTTTC GTCGTTATTT CGAAGAGGCC GATCGCCGCA AAGGCAACAC GGGGGCTAAC CTGTTGTCTC TTTTGGAATC TCGTCTTGAC AATGTTGTGT ACCGGATGGG CTTTGGCTCA ACCCGTGCTG AAGCACGTCA GCTTGTTTCT CACAAAGCCA TGACCGTTAA CGGAAAAAGT GTCAACATTC CGTCATACAT GGTTAAAGCG GGCGATATGA TCGCTGTTCG CGACAAGTCG AAGAAGCAGA ATCGTATTGT GGAGGCGCTG CAACTGGCTC AGCAGGTCGG TATGCCGGCT TGGGTTGAGA TTAACGCTGA AAAAGCTGAA GGCACATTTA AGGCTGTTCC TGATCGCGAT CAGTTTGCCG CTGATGTCAA CGAATCACTG ATTGTTGAGT TGTATTCGCG TTAA
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Protein sequence | MARYLGPKAK LSRREGTDLF LKSARRSIGD KAKFDSKPGQ HGRTSGARTS DFGLQLREKQ KVKRMYGVLE KQFRRYFEEA DRRKGNTGAN LLSLLESRLD NVVYRMGFGS TRAEARQLVS HKAMTVNGKS VNIPSYMVKA GDMIAVRDKS KKQNRIVEAL QLAQQVGMPA WVEINAEKAE GTFKAVPDRD QFAADVNESL IVELYSR
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