| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4208 |
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| Symbol | |
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| ID | 3961925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4680475 |
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| End bp | 4683159 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637919021 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_525426 |
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| Protein GI | 89902955 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA ATTCAAGCGA CACTTTGCTG GGCACCAAGG TGAATTCCTT GCGCGCACCT
CGCGGAGCAA TAGATCGTGC GCGTCTGGAC GTCGTGCGGG CTGCTGCTTC ATTCGCACGC
TTGGTCACAC TTACCGCGCC GGGTGGCTTT GGAAAGACCA CCCTGGCCGC CGCTTGGACG
ACCCACTGGC TTGCGAGCGG TCACCATTGC GCATGGCTGA GTTTGGAGCA GGATGACGAC
GAGCCGGTGC GTTTCATGCA TGGCCTGACG CATGCGGTAG ATCGTCTTGG ACCAGGCGTT
GGTCAATCCG CCTTGGCACT ATTACAAGGC AGCGTGCTGG CCGCACCACG TGCCGTGGTC
TCGCTCCTGG TGAACGACCT CGAAAAAGTG CAGGGGGAAG TCTTTGTGGT GCTGGACGAT
TACCAGTGGA TCCACGATTC CGCCATTCAC GACGCTATGG CCTTCTTGGT ATCGCATGTG
CCGTCGACCG TGCATCTGGT GATTACTTCT CGGGACGCAC CGCCATTGAT GCTGTCGCGG
CTGCGTGCCC ATGGTGAATG GCTCAATGTC GATGCCAACG CAATGCGTTT CGACGCAAAG
GAGACGGACC ATTTCCTGCG CACAGCCTGC GCACAGCCAC CAACTGCAGC GCAAATTGCC
CAGTTGTATG CAAGTACAGG TGGATGGGCT GCGGCCCTGC GTATCGCAGC GCTTGGGCCG
GGTGGTGCAG GGGTACTTGA GGCAAGTGCT TCCGGCGCGT CGCGTGCCTT CACGCACCTA
ATTGAAGATC TGCTGGCAAG TATTCCAGTC GACACGGTTC GCTTCATGGC CCAAACAGCT
GTGCTTGAAC ATCTGAACGT GGATTTGTGC AATGCCGTGA CTGCACAAGA AGACAGCGCC
GAGCTTCTTG ACCAGCTTGA GCAGGTTAAC CAGTTGGTCG AGCCACTGGA CAGCGAAGGT
CGATGGCTGC GCTACCCCCA ACTGCTACGC GACTATTTGC TTGGCCCGCT CACTCAGCGA
CTGAAGATCG ACCAACTCCA GTTGCACGGT CGTGCTGCGC AGTGGTTCGC ACGCCAGTCC
GCCTGGACCG ATGCTGTGCG CCACGCCTTG GCAGCCGGCG ACGGAACCCA GGCCATCGAA
TGGATGGTGC ACTGCTGCAT GGCATTGGTA AAAACGGGCG ATCTAATGAC GCTTGTGGGT
TGGCGCCGCC AGTTCCCTGC GGAGCTGTTG CGATCGCAGC CAAGCGTGCA ACTGGCCGTA
GCGTGGGGGC TGACTCTGGC CATGCGCTAC GAGGATGCCG TGCCACTACT GGCGGAGATT
GAGCGTGCGA ACCCACTCAT CACAGGTCAC GCCGATGCAC AAGCCCAATG TTTGGCAGTT
CACGCCGTGG CCGCGGGGCT GCAAGACGAT TCGGCTCGCG CTGGTGAACT GGCGCGCGCA
TGGTGCGAGC TCGGCGTGCA GGGTGATGCA TGGACATTCA ACGTGGTCTC CAACGTCATG
CGATACGTAC ATTGGGTAAG CCGCGACTGG GCCGGTGTTT ACGAACAGCC TTGGGAGCCC
TACTCTTTTG AAGAGGATCG GCGCAACGTC TTTTCCACCG TGTATCGCGA AGTGATTCTC
GGCTATGTTG AAATGGAACA GGGGCGTCTG GGCTTGGCCG AGCGCCATGC CCGCGAGGCC
TTGCGGCAGG CCGAGATGTA TGCCGGCACT CAGTCGGTGT CCGCTGCTCT GGCCGCACCG
TTGCTCGCCA TGCTGCACTA CGAGCACGAT CGGCTTGAGG AGGCAGCGGC ATTGTTACAC
CCGTTGGTCT CCCTCACAGA CAACACCGCA ATTCTTGAGA GCGTAATGCA GACCTACTTG
GTTCTTTCCA GAATCGCGTG GATCCAAGGA CAATGCGAAC GCGCCTTTGA GCTGATCGGG
CATGCAGAGG CTATTGGATA CAACCGAGGC TGGGACAGGC TAGTAGGCGC CATGCTGATG
GAACGGTTGA AGCGGCTCAT TGATGAGAAC CGACTTGACG AAGCCAACGC GACAGCTGTT
CGTTTGGCGC GACTCGCAGC ACTCAAAGCC ACTTTGCCAT CAGGCGTGCA TACCGACTTG
CTTGTTTTTC GCGACTGGGG GCATGCGTTG GTGGCATTGG CGGATCGACG TGCCAGTGAG
GCCCGCATTG CGCTGAGGCG TCTCTTCGAC CTTGCGAAGT CGGAGCGCAA CGACTTGCGT
GCCATTCAAA CCGGTACTTC ACTGGTGTTG GCACATATGG CGGACGATGA CCGTGATGGG
GCCTTTGAGA CGCTGCGCGA GGTAATACTG ACAGCGCAGC GCATTGGTGT ACACCGCAGC
ATTCTGGACG CCGGAGGCGA TCTGCAGGCC CTCCTGCCAC GCTTTTTGGT CAGTAGCCAC
TGCAATGCCG AGCTTGCCAT CAGCGTTCGG CGTCTGTTGG CCGTTGACGC AAATGAAGCG
GACAAGGCCA ACAAAACAGG CGTTGCCGGG ACGCTCACTG AGCGCGAGCG CGACGTCCTG
ATGTTGGTGG CGTCAGGCCA ATCCAACAAA GAAGTGGCGC GGTCGATGAA CATATCCGCA
GAAACGGTGA AAACGCACTT AAAAAGCATT TTCGGCAAGC TTGGAGTTCA GCAACGAGAA
CAGGCAGTGG TCCTAGCGCG AGCTGTTGGA CTTATTGCTG AATGA
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| Protein sequence | MEINSSDTLL GTKVNSLRAP RGAIDRARLD VVRAAASFAR LVTLTAPGGF GKTTLAAAWT
THWLASGHHC AWLSLEQDDD EPVRFMHGLT HAVDRLGPGV GQSALALLQG SVLAAPRAVV
SLLVNDLEKV QGEVFVVLDD YQWIHDSAIH DAMAFLVSHV PSTVHLVITS RDAPPLMLSR
LRAHGEWLNV DANAMRFDAK ETDHFLRTAC AQPPTAAQIA QLYASTGGWA AALRIAALGP
GGAGVLEASA SGASRAFTHL IEDLLASIPV DTVRFMAQTA VLEHLNVDLC NAVTAQEDSA
ELLDQLEQVN QLVEPLDSEG RWLRYPQLLR DYLLGPLTQR LKIDQLQLHG RAAQWFARQS
AWTDAVRHAL AAGDGTQAIE WMVHCCMALV KTGDLMTLVG WRRQFPAELL RSQPSVQLAV
AWGLTLAMRY EDAVPLLAEI ERANPLITGH ADAQAQCLAV HAVAAGLQDD SARAGELARA
WCELGVQGDA WTFNVVSNVM RYVHWVSRDW AGVYEQPWEP YSFEEDRRNV FSTVYREVIL
GYVEMEQGRL GLAERHAREA LRQAEMYAGT QSVSAALAAP LLAMLHYEHD RLEEAAALLH
PLVSLTDNTA ILESVMQTYL VLSRIAWIQG QCERAFELIG HAEAIGYNRG WDRLVGAMLM
ERLKRLIDEN RLDEANATAV RLARLAALKA TLPSGVHTDL LVFRDWGHAL VALADRRASE
ARIALRRLFD LAKSERNDLR AIQTGTSLVL AHMADDDRDG AFETLREVIL TAQRIGVHRS
ILDAGGDLQA LLPRFLVSSH CNAELAISVR RLLAVDANEA DKANKTGVAG TLTERERDVL
MLVASGQSNK EVARSMNISA ETVKTHLKSI FGKLGVQQRE QAVVLARAVG LIAE
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