Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4206 |
Symbol | |
ID | 3961923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4677856 |
End bp | 4678971 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637919019 |
Product | saccharopine dehydrogenase |
Protein accession | YP_525424 |
Protein GI | 89902953 |
COG category | [S] Function unknown |
COG ID | [COG3268] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACCA ATTACCAAGT GGTGCTGTAT GGCGCCAGCG GCTACACCGG CAAGCTCACT GCGTGGAAGC TGGCCAAACG CGGCATCCCG TTCATTGCTG CAGGACGTGA TGCTGCCCGC CTTGCCGCAG AAATGGAAAA AATTCCTGAA CTCAAGGGCC ACGACTATAA GTGCGTTAGC GTCAAGCACG ACACCGCCTC GCTGATCGAG CTGCTACAGG GCAAGAAAGT AGTTCTAAAT ATCGTCGGGC CCTTCATGCA ATTGGGCCTG CCAGTGGTGC AAGCCGCGCT GGCTGCCGGT TGCCACTATT TCGACACTAC GGGTGAAACC GACTGGATCA TGCGGCTGAA GAAGGAGTTC GGTGCAGCCT TCGCAGAGAA GGAACTCGCA CTGTGTCCGG CCAACTCCTA TATGTGGACC GAGGGTACGC TGGCAGCGGA GATTGCGCTG GAAACCCCGG GCATCGACTC GCTGGACCTG TTGTACTACG GCGACTCTGA GGTAAGCGTG GCATCGACCA TGTCTTTTCT GCGCATGTGC ACCAAGCCGA TGTACTACCT TAAAGGCGGT GCGCTCGTGC AGTGGCCTTG GGCCACTGCC TATGACGTCA CCGTTCCAGG CATCCACCGA GTGCTCAAGG CGCTGCCTTG GGGTGGTGCT GGAGAGCCTG TGTGGTACGA AGGCGATCCG CGCGTGAAGA ACTGTTCGGT GCTGTTTTCA TTGGGAAATC AGGAGATATT CATGAGCATC CTCGGGCTGC TACAGCAATT TGAGACGGAC CATCGGCACC TTGACGCTGC GGCACAGGAA GAGGTGACCA ACGCCATTGG CAAACAAGTG ACGCAGGTGG AGCCGCCTCG TGAGTTGCCA GAAGTGCACC GCAACGTCGT GTCCTGCCAG GCGCGTGGCA ACACAAAATC GGTCAGTGTC ATCCTGCGCG GTAGCTGCGC TTACGCACAG ACAGGCGTGT TCGCGGCCGA AGCTGCGATG CGCGTGCTGG CCGGCAAGCA CAAGGCTGTG GGATTTGGCT CGGGTTCGGC CATTTTTGGC GCGCGGCAGC TGCTGGCGGT CCAGGCCGAA GAAGGCTATC TCTCCTATGA GATTACGCAA CAGTAA
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Protein sequence | MTTNYQVVLY GASGYTGKLT AWKLAKRGIP FIAAGRDAAR LAAEMEKIPE LKGHDYKCVS VKHDTASLIE LLQGKKVVLN IVGPFMQLGL PVVQAALAAG CHYFDTTGET DWIMRLKKEF GAAFAEKELA LCPANSYMWT EGTLAAEIAL ETPGIDSLDL LYYGDSEVSV ASTMSFLRMC TKPMYYLKGG ALVQWPWATA YDVTVPGIHR VLKALPWGGA GEPVWYEGDP RVKNCSVLFS LGNQEIFMSI LGLLQQFETD HRHLDAAAQE EVTNAIGKQV TQVEPPRELP EVHRNVVSCQ ARGNTKSVSV ILRGSCAYAQ TGVFAAEAAM RVLAGKHKAV GFGSGSAIFG ARQLLAVQAE EGYLSYEITQ Q
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