Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4196 |
Symbol | |
ID | 3961913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4665237 |
End bp | 4666238 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637919010 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_525415 |
Protein GI | 89902944 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0992694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCA GCTTGAAATC CTTAGGCGCC GCGTTGGCGC TCGGCATGAG CATCGCCGCT ACACCAGCAG TCGCGCAGAG CAACGTCACG ATCCGCTTTC CGGTCGAGTA CGCGGCCAAC TTCTCAGCTG GTTTGGCCGA TCAGGACTTC GTCAAACGCA TCGAAGAAAT ATCGAAAGGG CACATCAAAG TGCGCTTTGC ACCCAACGGT TCGATGTACA AAGGGAATGA ATTGGTGCAG GCGATGCTGC GCGGCGACGC CGAGATGACG ACGCTTGTTC CGGCCTACTG GACCAGCATC GCCCCCAAGG TGCAACTATT CGATCTCCCC TACGCCTTCC CGGACTACGA GACATTCGAT CGCGTTGCCA GCAACAAAGC ATTTGTCTCC AAGGTCTTCG GTGAGGCCGA AGCCAAAGGA GCCAAGGTGC TGGGCCTGTT GGTGAATTGT TACATCTTGC CAGGCACACG TAGTCGTCAG CTTGTCGAGC CCAAGGACTT CAGTGGTCTG AAGTTGCGTG GGGTCGGTAA GGTGAACTCG ACAACGATGA AGGTGCTGGG CGCGAATGCG GTCTCGATCA ACATCACCGA GATGCCTGCT GCGTTGCAGC AGGGGTTGGT TGACGGCATG CAGACTTTGA TGGATGCGTA TGTGGAATAC AAGTTTTACG ACAACATCAA GTACGTCACC GACGCGCACT ATCAACTGAT CTATTACCCA TGGACGGTTA ACGCCAAGTG GTTCAACGGA CTGTCCGCAG CCGACCAAGC GCTAGTGCAG CAGGCTGTAG ACGACGCGAT TTTGGCTAAC CGTCAGCGTG TGATAAAGAT CGCCGCCGAC GCGACCAACG TGATGAAGGC TAAGGGTGTC AGCATCGTCA AACTCAGCGC GCAGCAAGAA AAAGCCTGGC AGGATGCGAC TGCGCCGGTG TGGAAGCAGC TTGAGGCAGA TCTTGGCAAG GAAATCATTG ATGAGTTTAA GGCCGTGCGG GCCGTACGCT GA
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Protein sequence | MNFSLKSLGA ALALGMSIAA TPAVAQSNVT IRFPVEYAAN FSAGLADQDF VKRIEEISKG HIKVRFAPNG SMYKGNELVQ AMLRGDAEMT TLVPAYWTSI APKVQLFDLP YAFPDYETFD RVASNKAFVS KVFGEAEAKG AKVLGLLVNC YILPGTRSRQ LVEPKDFSGL KLRGVGKVNS TTMKVLGANA VSINITEMPA ALQQGLVDGM QTLMDAYVEY KFYDNIKYVT DAHYQLIYYP WTVNAKWFNG LSAADQALVQ QAVDDAILAN RQRVIKIAAD ATNVMKAKGV SIVKLSAQQE KAWQDATAPV WKQLEADLGK EIIDEFKAVR AVR
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