Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4195 |
Symbol | |
ID | 3961912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4664699 |
End bp | 4665229 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637919009 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_525414 |
Protein GI | 89902943 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.293358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACCGGG AAAAAGACTA CAAGATGAAT GATGACGAAA TCGTCATTCC ACGGCGCCAC ACCTTTGAAG AATGGGTGGC GGCCTTTGGA ATGTTCCTGA TGTTGGTGCT CGTATGCGTC GAAATCACAA AGCGCGAGTT CTTCAACTCG TCGTTTCTGT GGAGTGAGGA AGTCGCACGC TATCTGATGA TCTGGTCAAT CTACTTCGGC GCATCCGCTG CGGTGGCTTC CGGTTCGCAC CTGCGCATTG ACATGCTGAT CGATATGGTG TCCAGCCGAG TACGGAGACT GCTCGATATC TTTGCGCAGT TTTGGGTGTG TGCGTTTTCA CTCGCGATCA CGTACGCGGG TTACCACTAT GTGGAGGACA GCTTCACTCA GGGCTTCGTG TCGGCGGATT CCAACCTGCC GTTGCAGATG GGTTGGATCC AACTGGTGAT TCCCGTGACT TTCGCTCTTT CTGCATTCCA CGCCCTGCGG CAATTGAGCA AGCTCGTCGC GACCGACCGT GCTTCTCCCA AGGAAATCTA A
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Protein sequence | MNREKDYKMN DDEIVIPRRH TFEEWVAAFG MFLMLVLVCV EITKREFFNS SFLWSEEVAR YLMIWSIYFG ASAAVASGSH LRIDMLIDMV SSRVRRLLDI FAQFWVCAFS LAITYAGYHY VEDSFTQGFV SADSNLPLQM GWIQLVIPVT FALSAFHALR QLSKLVATDR ASPKEI
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