| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4174 |
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| Symbol | |
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| ID | 3961872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4643745 |
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| End bp | 4644419 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637918991 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_525396 |
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| Protein GI | 89902925 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00728249 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTC TTGATCACCT GGAAGAGTGG CTGGTCACCT TCCTGATGGG CGCTGCGACG
CTGATCATCT TTGTGGCGGT GGTGCACCGC TACGCCGCTG GCCTGCCGAT ACCCGGCGTG
CAAGACTGGC TCTTGTCCCT CTCCTTGAGC TGGGCGCAGG AGCTGACCAT CATCATGTTT
GTCTGGATGG CCAAGTTTGG CGCCGCGTAT GGCGTGCGCA CCGGCATCCA CGTCGGGGTG
GACGTGCTGA TCAACCGCAT GCAAGACAAG ATGAAGAGCA AATTCATTGT CTTCGGACTG
TGTGCGGGCG CCCTGTTCAC CGGCATTGTG GCCACCCTGG GTGCCACTTT TGTCTGGGAC
AACGGCGCGC ACCATGCCTG GTTCAACCTG TTGGGTTTGT CCGTAGAAGG CATACCCGAA
GGTCCCACTA CGCCGGACCT CGAAATGCCA ACCTGGATGG TTTACAGCGC CGTGCCGCTG
GGCACCAGCC TGATGTGTTT CCGGTTTTTG CAAGTCATGG TCAATTTTCT TAAAACCGGT
GAACTGCCGC ACCACGACCA CGGCCATGTC GAGGGTCTGG AAGCCGAAAC ACCCCCGGTC
GACTTCAACC CGCTTGCCAT GGATGACAAC CTGCACCCTT CTGATTTGCA GAACAAAGAA
GGGGATTCGA AATGA
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| Protein sequence | MKFLDHLEEW LVTFLMGAAT LIIFVAVVHR YAAGLPIPGV QDWLLSLSLS WAQELTIIMF
VWMAKFGAAY GVRTGIHVGV DVLINRMQDK MKSKFIVFGL CAGALFTGIV ATLGATFVWD
NGAHHAWFNL LGLSVEGIPE GPTTPDLEMP TWMVYSAVPL GTSLMCFRFL QVMVNFLKTG
ELPHHDHGHV EGLEAETPPV DFNPLAMDDN LHPSDLQNKE GDSK
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