Gene Rfer_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4170 
Symbol 
ID3961868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4641138 
End bp4641656 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID637918989 
ProductMaoC-like dehydratase 
Protein accessionYP_525394 
Protein GI89902923 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00256261 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAGG TCGTCAAGCA AGTCGGTGAG CATCGCTTTC GCGAGTCCTT TGGCCGCCAT 
TTCGAAGAGT TCAACATCGG CGACATCTAC GAGCACCGCC CGGGCCGCAC CGTCACCGAG
ACCGACAACA CCTGGTTCAC CTTGCTCACG ATGAACACGC ACCCGATGCA CTTCGACGCC
GAGTACGCCA AGGCTAGCGA GTTCAAGCGC TGCATCATCT GTAGTCCGTT CACGGTGGCG
TTGATGGTGG GCATGAGCGT CACCGACGTG AGCCAGAAGG CCATCGCGAA TCTGGGCTGG
ACCGACATCA AGCTCACGCA TCCGCTGTTC GCCGGCGACA CGCTGTATGC CGAGTCGGAG
GTGACGGACA AGCGCGAGTC AAAATCGCGC CCCGGCGCTG GCCTGGTGAC CGTGAAGACC
ACCGGCCTGA ACCAGGATGG CAAGGTCATT GGCACCTTTA GCCGCACCAT GCTGATCGCC
AAGATCGGCC ACAGCATCGA AGACAAAGTC AATTACTGA
 
Protein sequence
MVQVVKQVGE HRFRESFGRH FEEFNIGDIY EHRPGRTVTE TDNTWFTLLT MNTHPMHFDA 
EYAKASEFKR CIICSPFTVA LMVGMSVTDV SQKAIANLGW TDIKLTHPLF AGDTLYAESE
VTDKRESKSR PGAGLVTVKT TGLNQDGKVI GTFSRTMLIA KIGHSIEDKV NY