| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4168 |
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| Symbol | |
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| ID | 3961866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4638698 |
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| End bp | 4639900 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918987 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_525392 |
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| Protein GI | 89902921 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGC CTTTACCCCT GGCGGGTGTG CGCATCCTCA GTGCCGAACA GTACGGTGCC
GGTCCGTTTG GATCGATGAT GCTGGCCGAC CTTGGCGCCG AAGTCATCAA GATCGAAAAT
CCGCGCGACG GCGGCGATAT CTCGCGGACG ACAGGTCCGT ACTTTCTCGG CGATAAGGAC
AGCCATTTCT TCCAGTCCTT CAACCGCAAC AAGAAAAGTC TGACCTTGGA TTTGAAGTCC
CCGGACGGGC AGGAGGTGTT TCGCCGCCTT GCTAAAAGTT CGGATGCGGT CATGAACAAC
CTCCGCGGCG ACCAGCCTGC CAAACTAGGC CTCACTTACG AAGCGCTGAA GGCGGTGCGG
CCGTCGATCG TCTGCGTGCA CCTGTCGGCC TACGGCCGCG ACAACGATCG CGCCCATTGG
CCCGGTTACG ACTATCTCAT GCAGGCCGAG GCGGGTTATC TGTATCTGAC CGGTGAGCCA
GACGGACCGC CCGCCCGCAT GGGCCTGTCC ATTGTCGATT ACATGACGGG GATCACCACG
GCGCTCTCCT TGTTGGCGGC ACTGATGGGC GCGCAGCGAT CGGGGCAGGG CCGCGATGTG
GACGTTAGCC TGTTTGACGT CGCCTTGGCG CAACTGACTT ATCCGGCGAC GTGGTTCATG
AACGACGGGC ATGTCACAAA GCGCATGGCG CGTTCGGCGC ACCCATCGGC CGTGCCGTGC
CAGTTGGTGC GCGCGAGCGA CGGCTGGATG TTCGTGATGT GCATGACGCC CAAGTTCTGG
CAGGCCCTGG TCGAGGGTAT CGGCCGACCC GAGTGGCTGG ACGATCCCCG TTTCGCAACG
CCCGCGACGC GACGCGACCA TCGGGATGTG CTCAGTGCAT TGCTTGACGA GGTCTTCTCG
GGAGCGACAA CCCGTAAATG GATGCAGCGG TTTGCGGGCA AGCTGCCGGT AGCGCCGGTC
ATGGACATCG AACAGGCGCT GACGAATCCT TTCGTCGGCG AGGTTGGCAT GGTCCAGTCG
ATGCCGCATC CCCATGCACC CGAGGGTGCG CTTCGTGTCC TCGCAAATCC AGTGAAGCTC
GATGGAGAGC GCTTGCCAAC CAAAGCGTGT GAGCCACTCG GCACCGCAAC TGATGCGCTC
TTGCACGAGG TCGGTTATAG CGACAGCGCG ATCGCGTCCC TGCGAGCCGC AGGCGTCGTT
TGA
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| Protein sequence | MKKPLPLAGV RILSAEQYGA GPFGSMMLAD LGAEVIKIEN PRDGGDISRT TGPYFLGDKD
SHFFQSFNRN KKSLTLDLKS PDGQEVFRRL AKSSDAVMNN LRGDQPAKLG LTYEALKAVR
PSIVCVHLSA YGRDNDRAHW PGYDYLMQAE AGYLYLTGEP DGPPARMGLS IVDYMTGITT
ALSLLAALMG AQRSGQGRDV DVSLFDVALA QLTYPATWFM NDGHVTKRMA RSAHPSAVPC
QLVRASDGWM FVMCMTPKFW QALVEGIGRP EWLDDPRFAT PATRRDHRDV LSALLDEVFS
GATTRKWMQR FAGKLPVAPV MDIEQALTNP FVGEVGMVQS MPHPHAPEGA LRVLANPVKL
DGERLPTKAC EPLGTATDAL LHEVGYSDSA IASLRAAGVV
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