| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4154 |
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| Symbol | |
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| ID | 3961852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4625723 |
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| End bp | 4627147 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918974 |
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| Product | N-formimino-L-glutamate deiminase |
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| Protein accession | YP_525379 |
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| Protein GI | 89902908 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATG ACATGAAGCC TTTCTTCGCG ACCCACGCTT GGGTCCGAGG GGCCTGGGCC
CGTGATGTGT TGCTGACCGT CGACGCCAGC GGCGCGTGGA GTGGCATTCA AGCCAACGCG
CCGGTGACAG CCAATCAAGA TGTGACCGTT CTCAATGGCC CGGTGCTGCC GGGTCTTGTC
AACGCCCACA GCCACGCGTT TCAACGTGCC ATTGCCGGAC TGACCGAGCG CAAGGCGGGG
GCAGGTGCTG CCATTAGTGA CGATTTCTGG AGCTGGCGCG ACCGCATGTA CTCGGTGGCC
CGGCGCATCA CGCCAGAGCA GTTGGAGACC ATCGCAGCCT TGCTTTATGC CGAACTGCTG
GCCGGCGGCT ATACGCAGGT GTGTGAGTTT CACTACCTTC ACAACGCGCT GGATGGCAGA
CCTTATGCCG ACCCGCTGGA GATGTCGCTG GCCCTGGTGC GGGCGGCGCA GCGTGTGGGC
ATGGGCCTGA CACTCCTGCC TACGCTGTAC ATGCGATCGG GTTTTGGTGC CACGGGGCTG
CGGGAGGACC AGCGCCGGTT TGCGTCGACA CCTGACAGCG TGTTGCGCCT GGTGGAGGGC
GTGCAGGCGC AAGCAGGTGC ACTGGCCCAT GTCAACGTGG GGGTCGCCGT GCACTCGTTG
CGGGCGGCCG ACGCGGCGGC CATCAAAGAG GTGGCGGCAT TTGCGGCCAA CAATGGTCTG
CCCATCCACA TTCATGTCGC GGAGCAAACG CAGGAGGTGC AGGACTGCCT CAATCACACC
GGGCAGCGTC CCATTGAGTG GCTGCTGGAA CACCTGCCGT TGAATGCCCA TTGGAACCTG
GTCCATGCCA CGCACGCTAC ACCTGTGGAG TTGCAGACGG TGGGCGCGAG TGGCGCCGCG
ATCGTCATTT GCCCGAGCAC CGAGGCCAAT CTGGGCGACG GCGTATTCGA TTTTTCGGGC
TATTCTGGCA TCGGTGGCCG TTGGTCGATT GGCTCGGACA GCAACGTTAA CCGCAGTTGG
ATCGAAGAGC TTCGTCTGCT GGAGTACTCA CAGCGCTTGA CGCAACGCAG GCGCAATGTG
GCAGCCCAGG CTGGCGGGTT TGACAGCTCC GCTGCGGCAT TGTTCGAGGC CGCATTGGCG
GGTGGTCAGT CGGCCACAGC CAGGCCCCTG GGGGCGATTG AATTGGGGCA CCGCGCCGAC
TTCCTGGTTT TGAATGAGCA GTCGTCGGTG CTGCTGGGGG TGCCGGCCGA GCACGTACTG
GATGCCCTGG TGTTTTCCAG CCCCGGTGCC AGGTTTAAAG AAGTTTTCGT TGCTGGCCAG
CAGCGTGTTG ATGGGGGGCG GGGGTGGGGG CGTGAATCGG GGCCTGCGCT TTGGCCTGAG
CTTGTACAGG AATTTGTGCG GACGATGAAG ACGTTGTGGA CGTAA
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| Protein sequence | MKNDMKPFFA THAWVRGAWA RDVLLTVDAS GAWSGIQANA PVTANQDVTV LNGPVLPGLV
NAHSHAFQRA IAGLTERKAG AGAAISDDFW SWRDRMYSVA RRITPEQLET IAALLYAELL
AGGYTQVCEF HYLHNALDGR PYADPLEMSL ALVRAAQRVG MGLTLLPTLY MRSGFGATGL
REDQRRFAST PDSVLRLVEG VQAQAGALAH VNVGVAVHSL RAADAAAIKE VAAFAANNGL
PIHIHVAEQT QEVQDCLNHT GQRPIEWLLE HLPLNAHWNL VHATHATPVE LQTVGASGAA
IVICPSTEAN LGDGVFDFSG YSGIGGRWSI GSDSNVNRSW IEELRLLEYS QRLTQRRRNV
AAQAGGFDSS AAALFEAALA GGQSATARPL GAIELGHRAD FLVLNEQSSV LLGVPAEHVL
DALVFSSPGA RFKEVFVAGQ QRVDGGRGWG RESGPALWPE LVQEFVRTMK TLWT
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