| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4139 |
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| Symbol | |
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| ID | 3961837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4611688 |
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| End bp | 4612860 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918961 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_525366 |
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| Protein GI | 89902895 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACC TTCGCACCCG GGCTGTCCAT GCCGGGCAGC ACCCTGACCC GGGCACCGGC
GCCATTGCCA CGCCCATCAG CCAGACGACC GCCTTTGGCT ATGGCACGCT GGAGCACGGT
GCTGCTATCT TTGCAGGCGA GGCGCCGGGC TACCGTTACA GCCGCTTTGC CAACCCCACC
GTGGCGGCGC TGGAGGCCAA GATGGCCGAC CTTGAAGGCG CGCAGGCAGC AGTGGCTTTT
TCCAGCGGCA CGGCGGCCAC GTCTTCGGTG CTGCTGGGGC TATTGAATCC GGGGGACGAA
ATCGCGTTCC TCGGACCGCT GTACGGCGGC ACCGAAGGGC TTTTTCGCGC GGTGGGTGAG
CGCTTTGGCA TCCGGGTTGT GGACGCCACG CAGCAGGGCC TGGCTGCCAG CCTCACACCG
GCTACACGCA TGGTGTGGGT GGAGACGCTG ACCAATCCCA GCCTGCGCCT GCATGATCTG
GCTGAAGTGG CCGCCATTGC CAAAGCGCGC GGCGTGCTCA CGGTGGCCGA CAACACTTTC
TGCACGCCGT GCCTGGTGCG GCCACTGGCG TACGGCATTG ACCTGGCGAT GCATTCCATG
ACCAAGTACC TGGGTGGGCA TGGTGACGCC ACGGGCGGCA TCGTGGCAGG CTCGGTCGCA
TTGATCGCGC CGGTGCGCAA GACCGGCCTG GGCCATGTGG GGGGTAACCT GTCGCCGCAG
GAAGCGTTTC TATTTCTGCG TGGCATCAAG ACGCTGCCAC TGCGCATGGC GGCACACTGC
GAGGGCGCGG CTGCGGTGGC CCATTTCCTG GCGGGCCACC CTGCGGTGCG GGTGGTGCAT
TACCCGGGTC TTGCCAGTCA CCCGCAGCAT GCGCTGGCGC GGCGCCTGTT GCAGGGCGGC
TTTGGCGGCA TGGTGGCTTT CGAGCTGGTG CGCAACGAGC GCTCTGCCGC TGCGGCCGTA
TTGAACCGGC TCCAGCTATT CACCCAGGCG GTCTCATTGG GTGACGTGGA CAGCCTGGCC
TGTCATCCGG CGAGCACCAC GCACAGCTTT GTCACGGCTG CGGTGCGAGC CCAAAATGGA
GTTACCGAAG GGCTGATCCG GCTCAGCGTG GGCATAGAGC ATCCGGACGA CCTGATGGCT
GACCTTGAAC ATGCGTTAAG ACATGCTGTT TAA
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| Protein sequence | MTHLRTRAVH AGQHPDPGTG AIATPISQTT AFGYGTLEHG AAIFAGEAPG YRYSRFANPT
VAALEAKMAD LEGAQAAVAF SSGTAATSSV LLGLLNPGDE IAFLGPLYGG TEGLFRAVGE
RFGIRVVDAT QQGLAASLTP ATRMVWVETL TNPSLRLHDL AEVAAIAKAR GVLTVADNTF
CTPCLVRPLA YGIDLAMHSM TKYLGGHGDA TGGIVAGSVA LIAPVRKTGL GHVGGNLSPQ
EAFLFLRGIK TLPLRMAAHC EGAAAVAHFL AGHPAVRVVH YPGLASHPQH ALARRLLQGG
FGGMVAFELV RNERSAAAAV LNRLQLFTQA VSLGDVDSLA CHPASTTHSF VTAAVRAQNG
VTEGLIRLSV GIEHPDDLMA DLEHALRHAV
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