Gene Rfer_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4113 
Symbol 
ID3961811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4590875 
End bp4591996 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content68% 
IMG OID637918937 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_525342 
Protein GI89902871 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGC TGTTTTCTCC CCTGCATCTG CCCTCGCCGC GCGGTGGCCT GACCTTATCC 
AACCGCATCG TGGTCGCGCC CATGTGCCAG TACTCGGCCC GCAACGGTGA GGCCAGCGAC
TGGCACCTGA TGCACTGGGG CAACCTGCTC AACAGTGGCG CGGCGATGTT CACCATCGAG
GCCACGGCCG TGCTGCCCGA AGGCCGCATC ACCCCCAGCT GCCTGGGACT GTGGGATGCG
CGCACTGAAG CCGCGCTGGC CGACAAGTTG CAGCGGGCGC GCCAGCTCGC GCCGCCCTTG
CCCGTGTGTA TTCAACTGGC GCACGCCGGG CGCAAGGCGT CCAGCGCGGT GCCGTGGCAA
GGTGGCCAAC TGCTGCCCGC CGCGCAGGGC GGCTGGGAGA CGTTTGGCCC TTCGGCCTTG
CCGCAACTTC CCAACGAACC CCCGCCCACC GAACTGACGC TGGCGCAGAT GGCGCAGATC
CGTGACGCGT TTGTGGCCGC TGCCCAGCGT GCCGCGCGCA TCGGGCTGGA GGCCGTGGAG
ATTCACGGCG CCCACGGTTA TTTGCTGCAT GAGTTCTTGT CGCCGCTGGC GAACCAGCGC
AGCGATGCCT ATGGCGGCAG TTTCGAGAAC CGCATCCGCT TTCCGCTGGA AGTATTTGCC
GCCGTGCGCG CCGCCTTTGA CGGCGTGCTG GGCCTGCGCG TCTCGGCCTC GGACTGGGTC
GAGGGCGGCT GGGACGTGGC ACAGAGTGCG GAGTTCGCGA AACGGCTGAA GACGCTCGGC
TGTGACTTCA TCCACGTCTC TTCCGGCGGT GTGTCGCCCC AGCAAAAGAT CGCTTTGGGG
GCGGGCTATC AGGTGGCCAT GGCGCGGGCC GTTCGTGCCG CCAGCGGCCT GGTCACCACC
GCCGTTGGTT TGATCACCGA GGCGCAACAG GCCGAGGCGA TTTTGCAGGC CGGTGACGCC
GACCTGATCG CACTGGCGCG GGCCTTTTTG TATGAGCCGC GTTGGGGCTG GCACGCCGCT
GCCGCCCTGG GCGGTCAAGT GGTGGCCAAC CCGGTCTACT GGCGCTGCCT GCCGCGCGAG
GCGCAGACGG TGTTTGGCAA GGTGTCGATT GGCGGGCGTT AG
 
Protein sequence
MSLLFSPLHL PSPRGGLTLS NRIVVAPMCQ YSARNGEASD WHLMHWGNLL NSGAAMFTIE 
ATAVLPEGRI TPSCLGLWDA RTEAALADKL QRARQLAPPL PVCIQLAHAG RKASSAVPWQ
GGQLLPAAQG GWETFGPSAL PQLPNEPPPT ELTLAQMAQI RDAFVAAAQR AARIGLEAVE
IHGAHGYLLH EFLSPLANQR SDAYGGSFEN RIRFPLEVFA AVRAAFDGVL GLRVSASDWV
EGGWDVAQSA EFAKRLKTLG CDFIHVSSGG VSPQQKIALG AGYQVAMARA VRAASGLVTT
AVGLITEAQQ AEAILQAGDA DLIALARAFL YEPRWGWHAA AALGGQVVAN PVYWRCLPRE
AQTVFGKVSI GGR