| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4112 |
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| Symbol | |
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| ID | 3961810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4588676 |
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| End bp | 4590757 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918936 |
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| Product | transketolase |
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| Protein accession | YP_525341 |
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| Protein GI | 89902870 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA CAGAACAAGC GCAAGCACCA CAAACAATCA GCGCCAACCG CGCTGAGATG
GCCAACGCGA TCCGCGCGCT GGCGATGGAC GCGGTGCAGG CCGCCAACTC GGGCCACCCC
GGCGCGCCCA TGGGCATGGC CGACATGGCG GTGGCTTTGT GGGGTCAGCA CCTTAAACAC
AATCCCGCCA ATCCCCACTG GTTTGACCGC GACCGTTTCG TACTCTCCAA CGGACACGCT
TCCATGTTGT TGTACTCGGT GCTGCATCTG ACCGGCTACA AGCTGCCCAT CACCGAGCTG
AAGAAATTTC GCCAGTTTGG TTCCAAAACG CCCGGCCACC CCGAGGTGGG GGTGACCCCC
GGCGTGGAAA CCACCACCGG TCCGCTCGGC CAGGGCATCA CCAATGCGGT GGGCATGGCG
CTGGCAGAGA AACTGCTGGC CAAAGAGTTC AATCGCGAAG GTCACGACGT CGTCAGCCAC
AACACCTTCA CCTTCCTGGG CGACGGCTGC CTGATGGAGG GCATCAGCCA CGAAGCGGCC
GCCCTCGCTG GCGCCTGGAA GCTCAACAAG TTGATCGCCC TGTACGACGA CAACGGCATC
TCGATTGATG GCCCGGTGGC GCCCTGGTTT ATCGACAATA CCGCGTTGCG TTTTGTGGCC
TACGGCTGGA ACGTGCTCGG CCCCATCGAT GGCCACGACG CTGACCTGGT CGCCAAAACC
ATCGCGGAGG CCAAGACCTC GGCTGACAAG CCCACGCTGA TCATCTGCAA GACCGCCATC
GGCCAGGGCA GCCCCAATCG CGCCAATACC GCCAAGGCCC ATGGCGAGCC ACTGGGTGCG
GAGGAAATCC TGCTGACCCG CGTTGCGCTG GGCTGGTCGC ACAAGCCTTT CAGCATCCCC
CAAGACGTGT ATGCCGCGTG GGATGCCAAG GCCGCCGGCG CCGCTGCCGA GGCGGCCTGG
AACGACAGGT TTGCCGCCTA CAAAGCGGCC TTCCCCGACC TGGCGAAAGA GCTGGTGCGC
CGCATGAAGG GTGAGCTGCC GAAAAACTTT GCCCAGGTCG CGGTCAATAC CGCCGTGGCG
GCCCACACCA AGGCTGAAAC CGTGGCCTCG CGCAAAGCCT CGCAACTGGC ACTGGAGTCC
TTCACTGCTG CGCTGCCGGA ACTGCTTGGT GGCTCCGCTG ACCTGACCGG CTCGAACCTG
ACCAACACCA AGAGCACGCC AAATTTGCGT TTTGACTTTA CCGGTGGCGT GGTGCAGACG
CCGAACGCCG ACGGCGTGAT GGTGGGCGGG CGCCACATCA ACTACGGCGT GCGCGAGTTC
GGCATGGCCG CCATCATGAA CGGCATTGCG CTGCATGGTG GCTTCATTCC CTATGGCGGC
ACCTTCCTGA CCTTTAGCGA CTACAGCCGC AACGCCATCC GCATGGCCGC GCTCATGAAA
CTGCGCGTGG TGCATGTGTT CACACATGAC AGCATTGGTC TGGGTGAAGA CGGCCCGACG
CACCAGTCGA TCGAACACGC GGCATCCCTG CGCCTGATCC CGAATCTGGA TGTCTGGCGC
CCCGGTGACA CGGCTGAAAC CGCCGTCGCC TGGGCGGTGG CCTTGCAAAA CAAAAGCAAG
CCCACCGCGC TGCTGCTGTC CCGCCAGAAC ATCCACTACG CGCCCAAGGC CGGTCTGGGT
GACATCAGCA AGGGCGCCTA CATACTGGCC GAGCCGTCTG AGGTGGGCCT GAAGAAAAAG
ACCCAGGCGG TGCTCATCGC CACCGGCTCC GAGGTGCAAC TGGCACTCAA GGCGCAGGAG
TTGCTAGCTA GCAGAAAAAT AGCGGTACGC GTCGTCTCCA TGCCGAGCAC CACCACATTC
GACCAACAAA GTGCAGCCTA CAAAGCAGCC GTGCTGCCCG TTGGCGTGCC ACGCATCGCG
GTCGAAATGG GCGTCTCCGC CGGCTGGTGG AAATATGGCT GTGCGGCGGT GGTCGGCATC
GACAGCTACG GTGAATCCGC ACCCGCGCCG GTGTTGTTTC AGCATTTCGG CTTTACCCCC
GAAAATGTGG CGGACACGGT AGAAAAGGTT TTGCGCAAGT AA
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| Protein sequence | MADTEQAQAP QTISANRAEM ANAIRALAMD AVQAANSGHP GAPMGMADMA VALWGQHLKH
NPANPHWFDR DRFVLSNGHA SMLLYSVLHL TGYKLPITEL KKFRQFGSKT PGHPEVGVTP
GVETTTGPLG QGITNAVGMA LAEKLLAKEF NREGHDVVSH NTFTFLGDGC LMEGISHEAA
ALAGAWKLNK LIALYDDNGI SIDGPVAPWF IDNTALRFVA YGWNVLGPID GHDADLVAKT
IAEAKTSADK PTLIICKTAI GQGSPNRANT AKAHGEPLGA EEILLTRVAL GWSHKPFSIP
QDVYAAWDAK AAGAAAEAAW NDRFAAYKAA FPDLAKELVR RMKGELPKNF AQVAVNTAVA
AHTKAETVAS RKASQLALES FTAALPELLG GSADLTGSNL TNTKSTPNLR FDFTGGVVQT
PNADGVMVGG RHINYGVREF GMAAIMNGIA LHGGFIPYGG TFLTFSDYSR NAIRMAALMK
LRVVHVFTHD SIGLGEDGPT HQSIEHAASL RLIPNLDVWR PGDTAETAVA WAVALQNKSK
PTALLLSRQN IHYAPKAGLG DISKGAYILA EPSEVGLKKK TQAVLIATGS EVQLALKAQE
LLASRKIAVR VVSMPSTTTF DQQSAAYKAA VLPVGVPRIA VEMGVSAGWW KYGCAAVVGI
DSYGESAPAP VLFQHFGFTP ENVADTVEKV LRK
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