Gene Rfer_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4108 
Symbol 
ID3961806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4586282 
End bp4586764 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content55% 
IMG OID637918932 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_525337 
Protein GI89902866 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.105651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA TCACCCCCTT TTTGTGGTTC GACAGCCAGG CCGAAGAGGC AATGAATTTC 
TATGTTTCGA TTTTCAGGAA CTCGAAAGTT TTGACTGTCA ATCGTTATGG TGAGGCAGGG
CCGGGTCCCA GGGGCACGGT CATGACCGCC AGTTTTCTGC TCGACGGGCA GGAGTTTGTC
GCACTCAACG GCGGGCCGCA ATACAAGTTC ACGCCGGCCA TCTCGTTTGT CGTGAACTGC
GAAACGCAGG CAGAAGTCGA TGACTTGTGG GACAAGCTCT CAGCCGGTGG CAGAGAAGAC
CAATGTGCCT GGTTGCAGGA CAAGTTCGGT GTCTCCTGGC AGATCGTTCC CAGGGTGCTG
ATCGAGCTGT TGAATGACCC CGATCCGGCC AAGGCCCAGC GTGTCATGGC GGCCATGATG
AAAATGAAAA AGATCGACAT CGCCGCTTTG CAGCGCGCCG CTGCGCAAGG AGAGAACACA
TGA
 
Protein sequence
MQKITPFLWF DSQAEEAMNF YVSIFRNSKV LTVNRYGEAG PGPRGTVMTA SFLLDGQEFV 
ALNGGPQYKF TPAISFVVNC ETQAEVDDLW DKLSAGGRED QCAWLQDKFG VSWQIVPRVL
IELLNDPDPA KAQRVMAAMM KMKKIDIAAL QRAAAQGENT