| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4099 |
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| Symbol | |
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| ID | 3961797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4572854 |
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| End bp | 4573984 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918923 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_525328 |
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| Protein GI | 89902857 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACA TCGACGAATT CCGTGACGGC GAGGTCGCCA AAACCTTGGC CCTCAAGATC
GCCCGGCTGG CGCAGCCTGA GCGCAGCTAC AGCTTCATGG AATTTTGTGG CGGCCACACC
CACGCCATTT CCCGCTACGG CCTGTCCGAC TTGCTGCCGC CCAACGTGCG CATGGTGCAC
GGCCCCGGCT GCCCGGTGTG TGTGCTGCCG ATCGGCCGCA TTGACATGGC GATCGACCTG
GCACTGAAGC AAGGCGTGAT CCTGTGCACC TATGGCGACA CCTTGCGCGT GCCGGCCTCT
GAAGGCCTGT CGCTGATGAA GGCCAAGGCG CGCGGTGGCG ACATTCGCAT GGTCTATTCC
ACGCTCGATG CCTTGCAGAT TGCGCGCGAC AACCCCGAGC GCGAGGTGGT GTTTTTTGCC
ATCGGGTTTG AGACCACCAC ACCGCCAACG GCGCTGGCTA TTTTGCAGGC ACACCAGGAA
CAATTGAGCA ATTTCAGCGT GCTGTGCTGC CATGTGCTGA CACCCGCGGC GATCAGCCAG
ATTCTGGAGT CGCCCGAAGT ACGGCAGTGG GGCACGGTGC CGATTGACGG CTTCATCGGC
CCGGCGCATG TGTCAACCGT GATTGGCAGT CGGCCGTATG AATTTTTTGC CGAGGAATAC
CGCAAACCGG TGGTGATTGC CGGCTTTGAG CCGCTGGACG TGATGCAGGC GATTCTGATG
CTGGTCAAGC AGGTCAACGA AGGGCGTGCC GAGGTTGAAA ACGAGTTCGC ACGCGCGGTC
AGCCGCGACG GCAACCAGAA GGCGCAGGAC CGGGTCGCCG AGGTGTTCGA GTTGCGCCGC
GAATTCGAGT GGCGCGGGCT CGCCGTGGTG CCTTATTCCG CTTTGATGAT CCGTGAGAAA
TACGGCAGCT TCGATGCCGA GCGCCGCTTC AAGATGGATT ACCAATCGGT GCCCGACAAC
AAGGCCTGTG AATGCGGGGC CATTCTGCGC GGCGTCAAGC GACCGCAAGA CTGCAAGATT
TTCGGCACCG TCTGCACGCC GGAGAACCCG GTGGGCTCGT GCATGGTCAG CAGCGAAGGT
GCCTGCGCGG CGCATTACAG TTACGGGCGT TACAAGGACA TGACCCCATG A
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| Protein sequence | MKYIDEFRDG EVAKTLALKI ARLAQPERSY SFMEFCGGHT HAISRYGLSD LLPPNVRMVH
GPGCPVCVLP IGRIDMAIDL ALKQGVILCT YGDTLRVPAS EGLSLMKAKA RGGDIRMVYS
TLDALQIARD NPEREVVFFA IGFETTTPPT ALAILQAHQE QLSNFSVLCC HVLTPAAISQ
ILESPEVRQW GTVPIDGFIG PAHVSTVIGS RPYEFFAEEY RKPVVIAGFE PLDVMQAILM
LVKQVNEGRA EVENEFARAV SRDGNQKAQD RVAEVFELRR EFEWRGLAVV PYSALMIREK
YGSFDAERRF KMDYQSVPDN KACECGAILR GVKRPQDCKI FGTVCTPENP VGSCMVSSEG
ACAAHYSYGR YKDMTP
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