| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4096 |
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| Symbol | |
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| ID | 3961794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4569342 |
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| End bp | 4570280 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918920 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_525325 |
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| Protein GI | 89902854 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGTCA CTTGTGGCTG CGGTGTGGGT GAAGTCAAGA TTAAGGGTGA ACAGGCGCAT
ACGCACGACC ATGTGCATCC GGATGGCAGC AGCCACAGTC ATGATCATCC CCACGATCAC
GCGCATACGC ACGACCATGC TGACAGCGAT GCCCACCTAC ATTCGCACGA CGAAACCCCG
GCACACGCGC ACGCCCCAGG CGTCACGCCC AAACGCATGG TGCAGATTGA GCAGGACATC
CTGGCCAAGA ACAACGCTTA CGCGCAAGCC AACCGGCAAA ACTTGGCTGA GCGCGGCATT
TTTGCGCTGA ACCTGGTGTC CAGCCCCGGC TCCGGCAAGA CCACGCTGCT GTGCAAGACC
ATTGCCCTGT TGGGCCAGCA AGCCGTGGCC GTGATTGAGG GCGACCAGCA AACCAGTCAG
GACGCTGACC GCATTCGCGC CACCGGTGCC CAGGCGATCC AGATCAACAC CGGCAAGGGC
TGTCATCTGG ATGCCCACAT GGTCGGGCAC GCGATGGAAC AGCTCAAGCT GGAGGATGAA
TCCCTGCTGA TGATTGAAAA CGTGGGCAAC CTGGTGTGCC CCGCCGCCTT TGACTTGGGC
GAGGCGCACA AGGTGGTGAT CTTGTCGGTC ACCGAGGGTG AAGACAAACC GATCAAGTAC
CCCGACATGT TCCGTGCCGC CAGCCTGATG CTGCTCAACA AGATCGACCT GCTGCCGCAT
CTGAATTACG ACGTGGATGC GGCCATCGGC TTCGCGCGCC GGGTCAATCC TGGCATTCAT
GTCATTGAGC TCTCGGCCAC CAGTGGCGAA GGCATGGACG AGTGGCTGGC CTTTCTGCGT
GATGGCGTGT CCCAGGCCAG CGCCGACCGG CAGCAAACAG TGGACGGTCT GAAGGCGCGT
ATTGCCCATC TGGAAGCGCG CTTGCAGGCG CAGGCTTGA
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| Protein sequence | MCVTCGCGVG EVKIKGEQAH THDHVHPDGS SHSHDHPHDH AHTHDHADSD AHLHSHDETP
AHAHAPGVTP KRMVQIEQDI LAKNNAYAQA NRQNLAERGI FALNLVSSPG SGKTTLLCKT
IALLGQQAVA VIEGDQQTSQ DADRIRATGA QAIQINTGKG CHLDAHMVGH AMEQLKLEDE
SLLMIENVGN LVCPAAFDLG EAHKVVILSV TEGEDKPIKY PDMFRAASLM LLNKIDLLPH
LNYDVDAAIG FARRVNPGIH VIELSATSGE GMDEWLAFLR DGVSQASADR QQTVDGLKAR
IAHLEARLQA QA
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