| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4089 |
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| Symbol | |
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| ID | 3961787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4563772 |
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| End bp | 4564767 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918913 |
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| Product | hydrogenase 2 protein HybA |
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| Protein accession | YP_525318 |
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| Protein GI | 89902847 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.224971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACTC GTCGTCACTT CTTGAAAGGG GTTGTTGCGG GTGGCGCAGC GATCACCTCA
GCCGCAGTTG CGCCACCAGC TTGCGCGCGC GAGACCCATA GTCGCCCGGC CGAGGCGCTG
GGCCTGTTGT ATGACGCGAC GCTGTGCATC GGCTGCAAGG CCTGCGTGGC CGCCTGCAAA
GAGGCCAATA ACAATCCGCC GGAGTTCTCG ACCGAAGATC GTCTCTGGGA CACGCCACTG
GACACGTCGG GCTACACCTT CAACATCATC AAGATGTACC GCAACGGCAC GATGCAGACC
AAAGATGCCG AGGTGAATGG CTTTGCCTTC ATGAAGACAT CGTGCATGCA TTGCGCCGAC
CCCTCCTGCG TGTCTGCTTG TCCGGTGTCG GCCATGACGA AAGACCCGGC AACCGGCATT
GTGGCCTACG ACCCCGGCGC CTGTGTCGGC TGCCGTTATT GTGTGGTGGC TTGCCCGTTT
GGTATTCCCA AATACCAATA CGACTCGCCC ACCGGCAAGA TTGGCAAATG TGAGTTGTGT
CGTCATCGCT ACGCTGACGG TCACTACTCC GCCTGCGCCG AAGTATGCCC AACCGGTGCC
ACGCTCTATG GCCGCAGTGC CGATCTGCTG CTTGAAGCCA AACGACGTAT TGCACTCAAG
CCCGGCAGCG TCACACGTTA CCCGAGAGGC AAGATTGGCG GCCCGGATCA GAGCTATGAA
GGTCCGGTCG GCAACTATCT CCAGCACGTG TATGGCGAGA AAGAATTCGG CGGCACGCAG
GTGCTCAAAC TCTCCGCGGT AACTTTTGCC AAGGTCGGCA TGCCCGACTT GCCACCCAAG
TCGTCGGCGG CCACGTCGGA GACCCTCCAG CATTCACTTT ACGGTGGATT GGTGATGCCG
GTGGTCGTGT TGGGCGCATT GAGCTTCATT GCCAAACGCA ACGTACATGA CGAGGACGAT
GAGTCAGGCA CTGACAAAGA CAAAGGGGAG AAGTGA
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| Protein sequence | MDTRRHFLKG VVAGGAAITS AAVAPPACAR ETHSRPAEAL GLLYDATLCI GCKACVAACK
EANNNPPEFS TEDRLWDTPL DTSGYTFNII KMYRNGTMQT KDAEVNGFAF MKTSCMHCAD
PSCVSACPVS AMTKDPATGI VAYDPGACVG CRYCVVACPF GIPKYQYDSP TGKIGKCELC
RHRYADGHYS ACAEVCPTGA TLYGRSADLL LEAKRRIALK PGSVTRYPRG KIGGPDQSYE
GPVGNYLQHV YGEKEFGGTQ VLKLSAVTFA KVGMPDLPPK SSAATSETLQ HSLYGGLVMP
VVVLGALSFI AKRNVHDEDD ESGTDKDKGE K
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