Gene Rfer_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4087 
Symbol 
ID3961785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4561681 
End bp4562283 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content61% 
IMG OID637918911 
ProductHupE/UreJ protein 
Protein accessionYP_525316 
Protein GI89902845 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.248426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCT TGTCCCATAG ATTGCTGCGC AATGTCAGCG TTGGCAGCTT GGCGCTGGTT 
GCTGGTCTGG CGCAGGCCCA CACAGGGCAT GGCACCACGG GTGTCTTCGA GGGGCTGGTT
CACCCCTTCG GACTGGACCA TCTGCTGGCC ATGGTGGCAG TGGGCATGTG GTCGGTGTCC
GCCCTGCCTG CCAGCAGGGT CTGGTGGGGG CCTGCCACGT TTCTGCTTGC CCTGGTAATT
GGTGCAGCGC TTGGCGCCAT GGGCTTGACC ATGTCCTGGC TTGAACAGCT GATTTCCTTG
AGTGTGGTGC TGTTCGGTGT CATGCTGGTC GCCTCGCGTC AAAAAATGCC GCTCGCGCTT
GGCTTGGGAT TGATCGCCTT GGCGTCATCA ATGCACGGTC TGGCGCACGG TGCTGAAACC
CCGGATACCG GCTTTGCCGG CTACGCCGCT GGCTTTCTGT TAACCACCGC CACACTCCAC
TTGGGCGGTG CGGCGGCTGG TTTGGGCGTT CGCCGCTATC TCGCCAGCAC AGCCGACTGG
GTCATCACCG CGATGGGAAC CCTGTTGGGG GGTGCTGGTC TGTATTTGTT CAGCCAATTG
TGA
 
Protein sequence
MKFLSHRLLR NVSVGSLALV AGLAQAHTGH GTTGVFEGLV HPFGLDHLLA MVAVGMWSVS 
ALPASRVWWG PATFLLALVI GAALGAMGLT MSWLEQLISL SVVLFGVMLV ASRQKMPLAL
GLGLIALASS MHGLAHGAET PDTGFAGYAA GFLLTTATLH LGGAAAGLGV RRYLASTADW
VITAMGTLLG GAGLYLFSQL