Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4087 |
Symbol | |
ID | 3961785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4561681 |
End bp | 4562283 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918911 |
Product | HupE/UreJ protein |
Protein accession | YP_525316 |
Protein GI | 89902845 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2370] Hydrogenase/urease accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.248426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCT TGTCCCATAG ATTGCTGCGC AATGTCAGCG TTGGCAGCTT GGCGCTGGTT GCTGGTCTGG CGCAGGCCCA CACAGGGCAT GGCACCACGG GTGTCTTCGA GGGGCTGGTT CACCCCTTCG GACTGGACCA TCTGCTGGCC ATGGTGGCAG TGGGCATGTG GTCGGTGTCC GCCCTGCCTG CCAGCAGGGT CTGGTGGGGG CCTGCCACGT TTCTGCTTGC CCTGGTAATT GGTGCAGCGC TTGGCGCCAT GGGCTTGACC ATGTCCTGGC TTGAACAGCT GATTTCCTTG AGTGTGGTGC TGTTCGGTGT CATGCTGGTC GCCTCGCGTC AAAAAATGCC GCTCGCGCTT GGCTTGGGAT TGATCGCCTT GGCGTCATCA ATGCACGGTC TGGCGCACGG TGCTGAAACC CCGGATACCG GCTTTGCCGG CTACGCCGCT GGCTTTCTGT TAACCACCGC CACACTCCAC TTGGGCGGTG CGGCGGCTGG TTTGGGCGTT CGCCGCTATC TCGCCAGCAC AGCCGACTGG GTCATCACCG CGATGGGAAC CCTGTTGGGG GGTGCTGGTC TGTATTTGTT CAGCCAATTG TGA
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Protein sequence | MKFLSHRLLR NVSVGSLALV AGLAQAHTGH GTTGVFEGLV HPFGLDHLLA MVAVGMWSVS ALPASRVWWG PATFLLALVI GAALGAMGLT MSWLEQLISL SVVLFGVMLV ASRQKMPLAL GLGLIALASS MHGLAHGAET PDTGFAGYAA GFLLTTATLH LGGAAAGLGV RRYLASTADW VITAMGTLLG GAGLYLFSQL
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