Gene Rfer_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4084 
Symbol 
ID3961782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp4559330 
End bp4559938 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content53% 
IMG OID637918908 
ProductPT repeat-containing protein 
Protein accessionYP_525313 
Protein GI89902842 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000901223 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACT TGTCGGTTCA ATCGGCCGCA GTCTGGCTGG TGTTGGCTTC AGCAGCGGGC 
TGCAGCGATA GCAATGTTGG CAGCAGTGAG AGGCCTGCAT CTTCGCCCGT TGCCGTGAGT 
GCTAACGCAG TGACGGCAAA TGATGCCGCC GCAAAGACCG CCGCCAAAGC CGCCGATGCC 
GCTGCCGCAA CAACCGCCGC CAAAGTCACC GCCGCTGTAC CCACTGCTGT ACCTACTGCT 
GTACCTACTG CTGTACCTAC TGCTGTACCT ACTGCTGTAC CTACTGCTGT ACCTACTGCT 
GTACCTACTG CTGTACCTAC TGCTGTACCT ACTGCTGTAC CTGCGGATGC CGATGCGGCA 
CAAGCATTGT TCAAGCGAAA TAGTTGCAAC AAGTGCCATT CGGTTGATAA AAGCAAAACA 
GGTCCATCCC TGCAAAAGAT TGCAGCCAAG TACAGGGGCA AGGCTGATGG TCAAGAAAAA 
GTCATCACGA ATATTACGAC CGCACCCAAG ATCAAGCTTG ACGACGGTAG CGAGGAAGAG 
CACAAGATCA TCGATACCAA GGATCAGAAA GAACTGAAGA ATCTGTCTGA TTGGATTCTT 
TCGCAGTAA
 
Protein sequence
MKHLSVQSAA VWLVLASAAG CSDSNVGSSE RPASSPVAVS ANAVTANDAA AKTAAKAADA 
AAATTAAKVT AAVPTAVPTA VPTAVPTAVP TAVPTAVPTA VPTAVPTAVP TAVPADADAA 
QALFKRNSCN KCHSVDKSKT GPSLQKIAAK YRGKADGQEK VITNITTAPK IKLDDGSEEE 
HKIIDTKDQK ELKNLSDWIL SQ