Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4082 |
Symbol | |
ID | 3961780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4555694 |
End bp | 4556617 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637918906 |
Product | hypothetical protein |
Protein accession | YP_525311 |
Protein GI | 89902840 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain [TIGR03508] decaheme c-type cytochrome, DmsE family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0556738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAATTA AGCGTTTAAT GGCCGTCGTT GGCCTCAGTT TGTTCGGGTT GCTCGGTTCA GCCTGGAGCG CCGAGCCCGT CGGGGCGGCG TTGTGCGTGA CCTGTCACGA CGAAGAAGAC CTGCCAGACA TGAGCAGGTC CGCGCACGGC TTCACCGCTG ACAAACGCGC GCCGGATTGC ATCAGCTGCC ACGGCCCGAG TCCGACCCAT GCCAAGAAGC CAGCCGGCGT CGCCGAGCGG CCCCATCCCG ACCGGATGTT CACCAAGAAG TCGACCACGC CTGCGAGCGA GCGCAACGCG GCCTGCCTGA CCTGCCACAA CAAGGACGCC AAGCGCGCGT TGTGGGGCGG CAGCCAGCAC GATGCCGCTG ACGTTGCCTG CAATTCCTGC CACAAGATCC ATGCCAACAG CGACAAGGTG CTGTCCAAGG CCACCCAAAC CGATGTCTGC TACACCTGCC ACAAGGAGCA ACGCACACAG ATGAACCGGC CTTCGCACCA CCCGGTGCCA GAGGGCAAAA TGAGCTGCTC GGATTGTCAT AACCCGCATG GATCGGCCGG CCCCAAGCTG GTCAAGCGCG ACAGTATCAA CGACACCTGC TACACCTGCC ACGCCGAAAA GCGCGGCCCG TTCGTGCATT CGCATGAACC CGTCACCGAA GACTGCTCCA ACTGCCACAA TGCTCACGGT ACAACCGTTG CGTCCATGCT CAAGGCCCGT CCGCCCTTGC TGTGCCAGCA ATGCCACACG CCGCACGCCC AAACCGGCGA TGGCCCGATT CCTGGCCAGC TCACGAGCGC CACTCGCAGC CAGAACTCTG TCACCATCTG GCAGGGCCGT AGCTGCCTGA ACTGCCACAC GCAGGTTCAC GGTTCCAATA ATCCGTCGAC CACCAACCCG ACCCCACAGC TCTTGATGCG CTGA
|
Protein sequence | MRIKRLMAVV GLSLFGLLGS AWSAEPVGAA LCVTCHDEED LPDMSRSAHG FTADKRAPDC ISCHGPSPTH AKKPAGVAER PHPDRMFTKK STTPASERNA ACLTCHNKDA KRALWGGSQH DAADVACNSC HKIHANSDKV LSKATQTDVC YTCHKEQRTQ MNRPSHHPVP EGKMSCSDCH NPHGSAGPKL VKRDSINDTC YTCHAEKRGP FVHSHEPVTE DCSNCHNAHG TTVASMLKAR PPLLCQQCHT PHAQTGDGPI PGQLTSATRS QNSVTIWQGR SCLNCHTQVH GSNNPSTTNP TPQLLMR
|
| |