Gene Rfer_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4080 
Symbol 
ID3961778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4550312 
End bp4553122 
Gene Length2811 bp 
Protein Length936 aa 
Translation table11 
GC content60% 
IMG OID637918904 
Producthypothetical protein 
Protein accessionYP_525309 
Protein GI89902838 
COG category 
COG ID 
TIGRFAM ID[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000183317 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATACC CTGATTTGTC TAGTAGAAGT CGACTACGGT CGACCTGGCT CAAGTTCGCG 
TCAGCGAGCT TGCTAGCCGT CGCCATTGCA GGTTGCGGTG GTGGCAGCGA TGGTGCCCCC
GGTGCAACTG GTGCCCCTGG CGCCCCTGGT GCTCCTGGTG CCCCTGGCGT GGACCTCACT
GCCCTGGTGA ATGTCGGTAG CAACACCACT GCGGCAACGC CTGCAGCTGC AGCCGCCTGG
CAATCGCTTG CGCCCCAGGT CACGGTGACC AGCGTCACCA TCAACAGCGC CCCGGTTGTC
AAGTTCACCG TCAAGGATGC GGCTGGTAAA GCGATCGTGG GCCTTGCCAA CTACTCCCAA
AGTTCAACCG CCACCGTCAA GGGACTGACC AATCTGGGCT TCACCTTGGC CAAACTGGTG
CCCGGCACCA ATGGCGACCC CAGCAAATGG GTCAGCTACA ACGTTATCAG GCCCGTCACC
GTCGCAGAGC AGGGAGGCAC CATTGCCGCC ACTGCTTCGT GCAACAAGAC GGCCACTGCC
GCAGCCACCT GGTGCGGCAC CTACCCAACC ACCGACACAC AGGGCACCCT GGTCGATAAC
GGTGACGGCA GCTACCAATA CACCTTCTTC CGCGACGTCA CCAAGGTCAA GGACCTCGTC
GCCGGCCTAA CGGACACGGC TGATGGTCTT TCCAAGAAAG CTGACCTGGG CGACCTGAGC
TATGACCCGA CCCTGACTCA TCGTCTGGGG ATTCAACTCG GCGGTGCCGC TCCTGGCACG
GGCAGCAACA ATCCGACCGC CAACAGCACC GGAGCACCCG CTTCAGTCAA TATGGTCAAC
ACCGCAAACG CCGTGTACAA CTTCCGGCCC GATGGCGCGG CGGTGACCGC CTCGCGCGAC
ATCGTCAAAA TCGATTCCTG CAGTTCCTGC CACCAGGGCC AAGTTCTGGC GCATGGCAGC
CGCAAGGATC CCAACTATTG CGTGACCTGC CACACTGACC AGATCAGATA CTCGTTCAGC
ATGGAGGCGC CTGCCAGCGG CTTCACCTTG ACTGGTGGCA TAACGGGTAC AACGCAGCAG
AAACGTGCCG AGCAAGCGGT TGTCAATGGC CGGGCTGTCG GTAACCTGCC CAACTTCCTG
CATAAACTGC ACATGGGTAA CGGACTGGTC AAGCAAGGCT ACAACTACAA CGCCAATGGC
GGCGCCATGC TGTTCAATGA AGTCACCTTC CCGCAGAATG TCAATAATTG CACGACCTGC
CACGACGGTT CTGCGACCGC GGCGATCAAG ACTGCCAATG GCGACAACTG GAAGAGCGTG
CCCAGCCTTC TCGCTTGCGG CGCCTGCCAT GACGGCATCA ACTTTGCCAC TGGCACCGGG
GCAACACTGG CTGACAAGGC CAAGGATCTT GCAGCCAAAG TCGCAATTGG AACCACACAG
ACCGGTCACG TTGGTGGTGC CAAGGCCAAT AACGCCCAAT GCGTGTTGTG CCATGATGCA
GTAACCATTC CGACCTACCA CGCTGCCGAA AATGCATCGC CGCATAACCC GACCGTTCCG
GTCGGACTGA AGAATTTCAA ATACGAAATC AAGTCCGCCG CCGCCACTGC GACCAGCGTC
ACGGTCGTGT TCAAGATTAC CGCCGACGGA ACGCCAGTTA CCTTCTTGGC CCCAGCCGCA
GGCATGGCCA ATCCGTTGAC GGGCTTCACC GGTGCGCCAG GCTTCTTGCT GGCCTATGCA
AAGACGCAGG ATGGTGTCAC CACGCCGATC GACTACAACA ACCTGGGCAA TGGCCAAAGT
AACGCCCAGC CAGTCAGCGT GTCGATCGCC AGCTTGCTGG ACACAGCCAA GGCCACCACT
GTGGGCACCT TGGCCGGTCC TGACACCAGC GGGTACTACA CCGCAACCAT CGTTGGTACT
GCCAATGTCT TCCCCACCGG TGCGGTACTT CGTACGGTGG CACTGCAAGG TTATTTCACC
CAGGTTGCGC CTGCAGCCGC TCGCCACACC CTGTCGGTCG TGAAGATGGT GGGTACCGAC
GCAGCACGCC GTTCTGTGGT GGAGCCTAAC AAGTGCGGCA ACTGTCACGA GGTGTTTGAA
GGACACGGCG GCAACCGCAA CATCGGTCTT GGCTCTGAAG GCATTGTGGT CTGTCTCGTT
TGCCACAACC CTGGCTTGGT CACCAGCGGC CGGGGTATAC CAGACGTCAC GCTTGCCAAC
TGGAAGTTCA CGACTGCAGA AGATGCCATC CTGACGGCTT GGGGTGTTGT CAAGACCGCG
GTGAACGGCG CTTTGGGATT CCCGCAGGTC TCCAATAACT TCAAGGACAT GATTCACGGT
ATCCATGCTG GCAAGGACCG TACCAACCCG ATCGCCATTG CACGCAATCG CGGGGCCTCG
GTAAACTTGA CTGCTGGTAC ACAAAGCGGC GCGATCACAT TGATCGACGG CAACGAAATC
GGCTTCCCGG GCATTCTGAA CAACTGCGAG TCCTGCCACA AAGCCGGTAC TTACAGCACG
GTTCCGGCCA ACACGCTGGT GAGTTCATTT GAGGCAAACA TTGCTGCGGC GAACACGACC
ACGACCGACG CGGTGAACGC TCTCAAACAG CCGAATGTGT ACGACAAGGT GACGACCCCG
TTCACTGCCG CCTGCGTCAG CTGCCATGAC GCGGCCACAG CCCAGGCCCA CATGACCCTG
AACGGCGGTC AGATCCTGGT GCTACGCACT GCAGCAAACA CGGCGGGTGA ATCGTGCGCC
GTGTGTCACA GTGCTGGCAA GGAGTTTGAT GCCGCGGTCG TTCACAAATG A
 
Protein sequence
MKYPDLSSRS RLRSTWLKFA SASLLAVAIA GCGGGSDGAP GATGAPGAPG APGAPGVDLT 
ALVNVGSNTT AATPAAAAAW QSLAPQVTVT SVTINSAPVV KFTVKDAAGK AIVGLANYSQ
SSTATVKGLT NLGFTLAKLV PGTNGDPSKW VSYNVIRPVT VAEQGGTIAA TASCNKTATA
AATWCGTYPT TDTQGTLVDN GDGSYQYTFF RDVTKVKDLV AGLTDTADGL SKKADLGDLS
YDPTLTHRLG IQLGGAAPGT GSNNPTANST GAPASVNMVN TANAVYNFRP DGAAVTASRD
IVKIDSCSSC HQGQVLAHGS RKDPNYCVTC HTDQIRYSFS MEAPASGFTL TGGITGTTQQ
KRAEQAVVNG RAVGNLPNFL HKLHMGNGLV KQGYNYNANG GAMLFNEVTF PQNVNNCTTC
HDGSATAAIK TANGDNWKSV PSLLACGACH DGINFATGTG ATLADKAKDL AAKVAIGTTQ
TGHVGGAKAN NAQCVLCHDA VTIPTYHAAE NASPHNPTVP VGLKNFKYEI KSAAATATSV
TVVFKITADG TPVTFLAPAA GMANPLTGFT GAPGFLLAYA KTQDGVTTPI DYNNLGNGQS
NAQPVSVSIA SLLDTAKATT VGTLAGPDTS GYYTATIVGT ANVFPTGAVL RTVALQGYFT
QVAPAAARHT LSVVKMVGTD AARRSVVEPN KCGNCHEVFE GHGGNRNIGL GSEGIVVCLV
CHNPGLVTSG RGIPDVTLAN WKFTTAEDAI LTAWGVVKTA VNGALGFPQV SNNFKDMIHG
IHAGKDRTNP IAIARNRGAS VNLTAGTQSG AITLIDGNEI GFPGILNNCE SCHKAGTYST
VPANTLVSSF EANIAAANTT TTDAVNALKQ PNVYDKVTTP FTAACVSCHD AATAQAHMTL
NGGQILVLRT AANTAGESCA VCHSAGKEFD AAVVHK