| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4065 |
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| Symbol | |
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| ID | 3961744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4532514 |
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| End bp | 4533689 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918889 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_525294 |
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| Protein GI | 89902823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAT CATCGATTTC CCAACGTCGC CGCGCCCTGC TACTGGCAGC CGGCGCCTCC
CTCGTCGTTC CTCTGGCGCA CGCGCAGGCC GGCGAGGACA TCGTCATCGG CGGCTCCATT
CCGATGACCG GCGTGTTCGC CTTTGCCGGC GTCGGCATCA ACGCCGGCAT TGCCGACTAC
GTGAAAATCG TCAACGACGG CGGCGGCATC AAGGGCCGCA AGCTGCGTTA TGTGCCGGAG
GACACCGGCT ACAAGGTCGA TGTGTCCGTA GCGGCCTTCA AGAAGATCAC CAGCCAGAAC
AAGGTCAACC TTTATTACGG CGACTCCACC GCGTTTTCCA GAACCATCAA CCCCGAACTG
GAACGCACCG GCAACATCCT GATGACCGGC GCCTCCTTTG CCACCGAGCT CAACGACCCG
GTGAAATACC CCAACCAATT CCTGGTCGGC CCTGACTACA CCGAAATGTT CGGCATCCTG
CTGCGCCACA TCGCCAAGGA AAAGCCGGGT GCCAAGGTCG CTTTTGTCTA CTCTGACTCC
GAATTCGGCC GCGACCCCAT TGACACCAGC GAGGCCCTGG CCAAGAAGCT GGGCCTCAGC
GTGCCGGTCA AGATCATGAC CGCGCCCGGC AGCGTCGATG TGTCGACCGA AGTGATCAAG
CTGCGCCGCG CCGCGCCCGA CTACACCATT TTTCACGGCT ACATCCTGGC CCCGATCCCG
GAGTTCATCA CCCAGGGCAA ACAAATGGGC ATGACCAGCA AGTGGATGGG CACCTTCTGG
ACCATGGACA GCTCCACCGT CATGAAGATG GGCGAAGCCG GCGACGGTTT CATGGGTGTC
ATGCCCTACC GCTACTACTA CGACACCTCG GCCAAGGCGC CCATGCTGGA CAAGATTCGC
CAGTTGCATC CCGACTACCA GAGCACCGCC TACATCCAGG GCTTTCTGGC CGCGATGCTG
TTCACCGAGG CCGCCAAGCG CACGCTGGAC GCGGGCAAAG AGCTCAACGG CAAGAATTTC
AAGGCCGCGC TCAACAGCAT CAAGGACTTC GACACCGGCG GCCTCATTGG CGTGCCGATC
ACCATCAAGG GCAACTCCAT TCCGGTCGGT CGGGTCTACA AGGCCGACAT GAAGGCGCAG
AAGATGGTGG CCGCGTCCGA CTGGATCGCG CTCTGA
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| Protein sequence | MQTSSISQRR RALLLAAGAS LVVPLAHAQA GEDIVIGGSI PMTGVFAFAG VGINAGIADY
VKIVNDGGGI KGRKLRYVPE DTGYKVDVSV AAFKKITSQN KVNLYYGDST AFSRTINPEL
ERTGNILMTG ASFATELNDP VKYPNQFLVG PDYTEMFGIL LRHIAKEKPG AKVAFVYSDS
EFGRDPIDTS EALAKKLGLS VPVKIMTAPG SVDVSTEVIK LRRAAPDYTI FHGYILAPIP
EFITQGKQMG MTSKWMGTFW TMDSSTVMKM GEAGDGFMGV MPYRYYYDTS AKAPMLDKIR
QLHPDYQSTA YIQGFLAAML FTEAAKRTLD AGKELNGKNF KAALNSIKDF DTGGLIGVPI
TIKGNSIPVG RVYKADMKAQ KMVAASDWIA L
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