| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4063 |
|---|
| Symbol | |
|---|
| ID | 3961742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4530454 |
|---|
| End bp | 4531332 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637918887 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_525292 |
|---|
| Protein GI | 89902821 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGG CCTACCTGTT TGAAATCAGC TTGACCGGCA TTGCCAGCGG CGGCCTGTAT
GCGCTGGCGG CGCTGGCCTT CGTGATGGTG TACAAGGCCA CGCGCGTGGT GAACATCGCC
ATTGGCGAAA TGCTAATGGT CGGCGCTTAC CTGTTCTTTA CCTTCGCCGT TACGTTCGCG
CTCCCCATTT GGCTGGCCAT CCCGGCCGCC GTGCTGGGCG CCGGGCTGCT GGGCGCCGTG
ATCGAGCGCA CCATGATCCG CCCGCTGCTG GGTGAGCCGC CGATCTCGGT CTTCATGGTC
ACGGTCGGTC TGGCCTCCGT CCTGGTGGGC CTGGTCGAAA TCATCTGGAC GGCGGACCAG
CGCCGCCTGC CCGATTTTCT GCCCAACACA CCGGTCATGG TGGGTGATGC CTTCCTGGCG
CCCAAGGTGT TCTACGGCGC CCTGATTGCG GTCGTTCTGA TCGCCGTGGT GCTGCTGGTG
TTCCGCTTCT GGCGTGGCGG CGTCGCCCTG CGCGCCACCG CGTCGGACCC GGCGGCGGCC
TACTCCATGG GCATCAACGT GCCACGCGTG TTCTCGCTGG CCTGGGTCGT GTCCGCCATG
CTCGCCGCCG TCTCCGGCAT CATCGTCGGC TCCATCGGCG GCATTTCGTC CTCCATGGGT
GTATTCGGTT TGTCGGTGCT GGTGGTGGTT ATTGTCGGCG GCCTCGACAG CGTGCTCGGC
GCGCTGGTGG GCGGCTTGCT GATCGGCTTG GTTGAAGCAC TGGCAGGCAC CTACCTGGGC
GGCGAATACA AGTTGCTGGT CACTTTCATT GTGCTGGTGA TCGTGCTCAT GATCCAACCC
TATGGCCTGT TTGGCACCCA CGAGATTGAG AGGCTCTAG
|
|---|
| Protein sequence | MDWAYLFEIS LTGIASGGLY ALAALAFVMV YKATRVVNIA IGEMLMVGAY LFFTFAVTFA
LPIWLAIPAA VLGAGLLGAV IERTMIRPLL GEPPISVFMV TVGLASVLVG LVEIIWTADQ
RRLPDFLPNT PVMVGDAFLA PKVFYGALIA VVLIAVVLLV FRFWRGGVAL RATASDPAAA
YSMGINVPRV FSLAWVVSAM LAAVSGIIVG SIGGISSSMG VFGLSVLVVV IVGGLDSVLG
ALVGGLLIGL VEALAGTYLG GEYKLLVTFI VLVIVLMIQP YGLFGTHEIE RL
|
|---|
| |