Gene Rfer_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4056 
Symbol 
ID3961735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4523104 
End bp4524030 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID637918880 
Productprotein of unknown function RIO1 
Protein accessionYP_525285 
Protein GI89902814 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms 
COG ID[COG1718] Serine/threonine protein kinase involved in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGT TCCCGGCGTG CAGTATAGCG ACGGCTGACG CGTCACGACC CGGCGCCACA 
CAGTGCAAAA TACCGTTCAT GAAACCACCC GCAAGACTGC AATCGCTCAT CGAAGAAGGC
CTGATCGACA CCGTGGTGCG CCAGCTGATG AGTGGCAAGG AAGCCACCGT TTACGTGGTG
CGCCGCGCCA ATGAAACATG GTGCGCCAAA ATCTACAAAG AAGCGACCCA GCGCAGCTTT
CGCCAGGCGG TGGACTACAC CGAAAACCGC AAGGTCAAGA ATTCGCGCCA GGCCCGCGCC
ATGGCCAAGG GCACGCGCTT TGGCCGCGAG GCGGCCGAGG CAGCCTGGCA AAGCGCCGAG
GTGGATGCGT TGTACCGGCT GGCCGACGCC GGGGTGCGTG TGCCCAAGCC GCACAATTTT
ATTGAAGGCG TGCTGCTGAT GGAACTGGTG ACCGACGCCG CCGGCGACGC GGCGCCGCGC
CTGAACGATG TCACGCTTGA GCCCGCGCAG GCGCGCACGC ACCACGCCAC GCTGCTGCTT
GAAGTGGTGC GCATGCTGTG CGCCGGTGTG GTGCACGGCG ATTTGTCTGA ATTCAACATT
CTGCTGGGCG TGGATGGCCC GGTCATCATT GACCTGCCGC AGGCGGTGGA CGCGGCGGGC
AACCAGCATG CCCAGCGCAT GCTGCTGCGC GATGTGAACA ACCTGCGCAG CTTCTTCGGC
CAGTTCGCAC CCGAACTGCT GCAGACCGAT TACGGGCATG AGATCTGGGA TCTGTACCAG
CGTGGTCTGC TGAGCCCCGA GGTGACGCTC AGCGGGCGCT TCACGCACAA AAAAGGCGCC
GTGAATGTGA GCGGCGTGCT GCGCGAGATT GGCGACGCCC AGGCCGAGGA GGCGGCGCGC
CGCCTGCGCC AGCAGTTGCC GCGCTGA
 
Protein sequence
MFLFPACSIA TADASRPGAT QCKIPFMKPP ARLQSLIEEG LIDTVVRQLM SGKEATVYVV 
RRANETWCAK IYKEATQRSF RQAVDYTENR KVKNSRQARA MAKGTRFGRE AAEAAWQSAE
VDALYRLADA GVRVPKPHNF IEGVLLMELV TDAAGDAAPR LNDVTLEPAQ ARTHHATLLL
EVVRMLCAGV VHGDLSEFNI LLGVDGPVII DLPQAVDAAG NQHAQRMLLR DVNNLRSFFG
QFAPELLQTD YGHEIWDLYQ RGLLSPEVTL SGRFTHKKGA VNVSGVLREI GDAQAEEAAR
RLRQQLPR