Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4049 |
Symbol | |
ID | 3961728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4513305 |
End bp | 4514684 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918873 |
Product | adenylosuccinate lyase |
Protein accession | YP_525278 |
Protein GI | 89902807 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTTT CATCAATCTC AGCCCTGTCG CCACTGGATG GCCGCTATTG CGCCAAACTT GCCAAATTGC GCCCCATCAT GAGTGAGATG GGCTATATGC AGCGCCGCGT GCAGGTCGAA GTGGCCTGGT TCATCGCTCT GAGCGACTGC GGTTTCGCCG AATTCAAGCC CTTGACTCCC GGCGCACGCA CTTACTTGCT GGGCCTGGTC AAGAATTTCT CTGAAGCTGA CGGTGACGCC ATCAAGGAGA TCGAGAAAAC GACCAACCAC GATGTCAAGG CGGTGGAATA CTGGATCAAG TCCAGGTTTG AAGCCCGTCC CGAGCTGCTC GCGGCCCAGG AGTTTGTGCA CTTTGCCTGC ACCAGCGAAG ACATCAACAA CACCAGCCAT GCATTGCAGC TTAAAGCCGG GCGCGATCTG GTGCTGTTGC CCGCGCTCGA TGCCGTCATC GCCAAACTGC GCGAGATGGC GCATGCCTTT GCCGACGTGT CCATGCTCAG CCGCACCCAT GGCCAGACCG CCAGTCCGAC CACCGTGGGC AAGGAAATTG CCAATGTGGT GGTGCGCCTG GTGGCAGCGC GCGAAAAAAT CGCCAGCATC AAGCTGTTGG CCAAGATGAA TGGCGCGGTG GGCAACTTCA ACGCGCATCT GTCGGCCTGG CCCGACTTTG ACTGGGAAGC CTTCAGCCGC AGGGTCATCG AGACCCCGAC GCCGCTTGGC CTGGGCCTGA CGTTTCAGCC CTACAGCATC CAGATTGAAC CGCACGACTA CATGGCCGAG CTGTTCGACG CGGTGGCGCG CACCAACACC ATCCTGATCG ACTGGGCGCG CGATGTCTGG GGCTATGTGA GCCTGGGTTA CTTCAAGCAG CGCCTGCGCG AGGGCGAGGT CGGCTCCAGC ACCATGCCGC ACAAGGTCAA TCCGATTGAT TTCGAGAACG CCGAGGGCAA CCTGGGCCTG GCCAATGCGC TCTTGCGCCA TCTGAGTGAA AAGCTGCCGA TTTCCCGCTG GCAGCGCGAC CTGACGGACA GCACCGTGCT GCGCAACATG GGCGTGGCGA TGGGCTACGC GGTGCTGGCC TACCAGTCGC TCGCTACCGG CCTGGGCAAG CTGGAGATCA ACGAGGTCGC CATTGCCGCC GACCTGGACG CCTCGTGGGA AGTGATGGCG GAGCCGATCC AGACCGTGAT GCGCCGCTTT GGTTTGCCGC AACCCTACGA GCAGCTCAAG AAGTTCACCC GCGGTGAACC GATGACGCGC GAACTGATGC AGGGCTTTAT TGCCAAGCTG GAGATACCGC AGGCTGAGAA GCAACGCCTG CTGGCCATGA CGCCGGGCAG CTACACCGGC ATGGCGGCCG AGCTGGCCAA ACGGGTATGA
|
Protein sequence | MNFSSISALS PLDGRYCAKL AKLRPIMSEM GYMQRRVQVE VAWFIALSDC GFAEFKPLTP GARTYLLGLV KNFSEADGDA IKEIEKTTNH DVKAVEYWIK SRFEARPELL AAQEFVHFAC TSEDINNTSH ALQLKAGRDL VLLPALDAVI AKLREMAHAF ADVSMLSRTH GQTASPTTVG KEIANVVVRL VAAREKIASI KLLAKMNGAV GNFNAHLSAW PDFDWEAFSR RVIETPTPLG LGLTFQPYSI QIEPHDYMAE LFDAVARTNT ILIDWARDVW GYVSLGYFKQ RLREGEVGSS TMPHKVNPID FENAEGNLGL ANALLRHLSE KLPISRWQRD LTDSTVLRNM GVAMGYAVLA YQSLATGLGK LEINEVAIAA DLDASWEVMA EPIQTVMRRF GLPQPYEQLK KFTRGEPMTR ELMQGFIAKL EIPQAEKQRL LAMTPGSYTG MAAELAKRV
|
| |