Gene Rfer_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4038 
Symbol 
ID3961717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4503630 
End bp4505618 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content68% 
IMG OID637918862 
Productphosphoesterase, PA-phosphatase related 
Protein accessionYP_525267 
Protein GI89902796 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGCTT TGATCAACGC CCTTTCTCAG CACCCCCTGC TGGCACTCGC TGCGGTGTTC 
GCTGCGTCCC TGCTGGAGGC GGTGGCCGTG ATCGGCACCG TCATCCCGGG CAGTTCGGTG
GTGGTGGTTG GCGGCGTGCT GGTCGGCCTT CAGGTCCTTG ACCCATGGTG GGCCGCGCTG
GCGGCCGTTA CTGGCGCCAC GCTGGGCGAC GGCATGAGCT ACTGGCTCGG TCGTCATTAT
CACGAGCGGC TTTTGAACCT GTGGCCGCTG AAAAAGTATC CCGCGCTTTT TGAGAGTGGG
CAGGCGTACT TCACGCGAAA CGGCGGCAAG AGTGTGTTCC TGGGCCGGTT CCTCGGGCCG
GTGCGGGCCA TCGTGCCAGT CGTCGCGGGC ATGTCCGACA TGCCGGCGCC CAGGTTCATG
GTGGTGAACG TCCTGTCCGC CATCGCCTGG GCCGGCGTGC ACCTGCTGCC CGGTGTGCTG
TTCGGCGCTT CGCTGCAACT TGCCGGCGCG GTCAGTTCAC GTCTGTTGAT CCTGTTGCTC
GGATTGGTGG CGACCGTGTG GCTGTGCGCC GTGCTGTTGC GCCTGGCCCG TCGAAGGGTC
TGGCCGCTGG TCATCCGCTG GCGCGATCAC GCGGTGGCCT GGGCACGCGC AAGACCCGGC
GTGTTGCCGC GCGTCATCCT GTCGCTGCTC GACCCTGCGC GGGCGGAGTC GCTCGGGCTG
CTCATCGCGG CCTTGCTGCT GCTGGGCGGG GCCTGGATGT TTCTTGGCAT CCTGGAAGAT
GTGCTGTCGA ACGACCCGCT GGTGCAGTTC GACCACGTCG TGTTCACCGC CTTGCAGCAG
CTGCGCAGCG CCTGGGCCGA CCGGCTGATG ATCACCGCCA CCGAACTCGG CAGCACGCCG
GTCGCGTTCG CCGTGATCGC TGCGGTGGCG CTGCTGCTCG CACTGAAGCG GTGCTGGCGC
ACGCTGGCCT ATTGGTTGAC GGCCGTCGGC TTTGCCCAGG CGCTGGTCTG GATCCTGAAG
CTGACGCTGG GGCGGGCCCG GCCCATCACC ATGTACGCTG GCATGGAGCA GTTCTCCTTT
CCGAGCGGGC ACGCCGCGTC CAGCATCGTG CTGTACGGGT TCCTGGCGGT GCTGCTCGCG
CGGGGCAAGT CGCCCCGGGT CAGGTCGGCC ATCACGCTGG TGGTGGTGCT GCTGGTCGGG
CTCGTCTCGT TCTCGCGCCT GTACCTCGGG GCGCACTGGC TGTCGGACGT GCTTGCCAGC
CTGAGCCTGG GCACGGCCTG GGTCGCGCTG CTGAGCATGG CCTATTTGCA GCATGTGCGC
GGTGAGCGCC TGCCGGCCCG GGCCCTGTCG CTCACCGCGC TGGGGGCGCT GGTGCTGGCC
GGCGCGGGCG TGGTGGCGAC GCACCGGGCC GCGGATGTCA TCCGCTATGC ACCTCGCCAG
GCCGGCGCCA CCGTCACGCT CTCTGATTGG CCGTCCGGGG GATGGCTGCG CCTGCTGGCC
CGCCGAACCG AGGTGGATGG TGATTACGAG GAGCCGCTGG CGCTGCAATG GGCCGGTACG
GCGGACCGGA TCGAGCAGGT GCTGCAGGCC GGCGGATGGC AGCGGCCGCC GCCCTGGGCG
TCGCGTGCGG CGCTGTTGTG GTTGTTGCCG TCCTCGCCGG CCGGACAGCT CCCGGTGCTG
GCCAAGTTTC ACCAGGGCGA GGCGCCCACC ATGAGTTTTG AGCAGGAACT GGACCCGTCC
CAGCGCCTGG TGATCCGCCT TTGGCGCTCG TCCTACAGCG TCAACACGGC AAACAACCCC
GCTGCGCCCT TGTGGGTCGG CATGGTTACG CGTGAACGGT TGACGCATCC GGCAGGCCTG
CTCACGCTGG CCAGGACCGA CCCGGACTTC GCCGCGTCGA CGGCACAATT TGCCATGCTG
CTGCAGACCC ACAAGGTGGC TGTGACGATC AGGCACCGGG ACGCGCTGGC GGTGTTGCTC
CTTCAGTGA
 
Protein sequence
MQALINALSQ HPLLALAAVF AASLLEAVAV IGTVIPGSSV VVVGGVLVGL QVLDPWWAAL 
AAVTGATLGD GMSYWLGRHY HERLLNLWPL KKYPALFESG QAYFTRNGGK SVFLGRFLGP
VRAIVPVVAG MSDMPAPRFM VVNVLSAIAW AGVHLLPGVL FGASLQLAGA VSSRLLILLL
GLVATVWLCA VLLRLARRRV WPLVIRWRDH AVAWARARPG VLPRVILSLL DPARAESLGL
LIAALLLLGG AWMFLGILED VLSNDPLVQF DHVVFTALQQ LRSAWADRLM ITATELGSTP
VAFAVIAAVA LLLALKRCWR TLAYWLTAVG FAQALVWILK LTLGRARPIT MYAGMEQFSF
PSGHAASSIV LYGFLAVLLA RGKSPRVRSA ITLVVVLLVG LVSFSRLYLG AHWLSDVLAS
LSLGTAWVAL LSMAYLQHVR GERLPARALS LTALGALVLA GAGVVATHRA ADVIRYAPRQ
AGATVTLSDW PSGGWLRLLA RRTEVDGDYE EPLALQWAGT ADRIEQVLQA GGWQRPPPWA
SRAALLWLLP SSPAGQLPVL AKFHQGEAPT MSFEQELDPS QRLVIRLWRS SYSVNTANNP
AAPLWVGMVT RERLTHPAGL LTLARTDPDF AASTAQFAML LQTHKVAVTI RHRDALAVLL
LQ